Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC083982.1-201ENST00000485679 344 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 RN7SL346P-201ENST00000491561 294 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AK4P6-201ENST00000505168 528 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 RN7SKP276-201ENST00000516242 268 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 CYCSP28-201ENST00000534284 321 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 MIR3667-201ENST00000581025 74 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 MIR4737-201ENST00000583979 81 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AC091178.1-203ENST00000584586 279 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AL137072.1-201ENST00000603444 466 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 uc_338.18-201ENST00000615451 175 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AP003400.2-201ENST00000624036 666 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AC135352.1-201ENST00000506173 1418 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AC233968.1-201ENST00000611212 1300 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS1Q01581 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS1Q01581 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS1Q01581 RNA5SP151-201ENST00000365632 117 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 RNU6-1263P-201ENST00000384601 106 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 SEPT7P8-201ENST00000413308 775 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 RLIMP2-201ENST00000427891 1563 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 RPL21P91-201ENST00000429231 479 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC008072.1-201ENST00000434254 824 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 NPM1P39-201ENST00000449818 867 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 SOX5P1-201ENST00000524155 1127 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 GSTP1P1-201ENST00000548078 319 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 RPL21P7-201ENST00000557463 483 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC122134.1-201ENST00000565664 1104 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC027455.1-201ENST00000574104 594 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AP005901.4-201ENST00000577336 569 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC008966.2-201ENST00000606157 453 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 BX323046.1-201ENST00000610145 535 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 Mico1.1-201ENST00000611698 204 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 RBPJP2-201ENST00000618187 1444 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 MIR6853-201ENST00000619642 74 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AP001784.1-201ENST00000624107 428 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC107021.2-201ENST00000567714 2095 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC027290.2-201ENST00000623210 18662 ntBASIC4.42□□□□□ -1.7
HMGCS1Q01581 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS1Q01581 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS1Q01581 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGCS1Q01581 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS1Q01581 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 SDAD1P1-202ENST00000524156 2051 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 RNU1-20P-201ENST00000363314 162 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 RNA5SP87-201ENST00000384155 118 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 RN7SKP267-201ENST00000410381 285 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 RN7SKP100-201ENST00000411258 284 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 OR13Z1P-201ENST00000416141 834 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC005154.2-201ENST00000438110 379 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC006466.1-201ENST00000438721 289 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 ISCUP1-201ENST00000454451 448 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC105233.1-201ENST00000498840 781 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms