Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRKDCP78527 AC074029.4-201ENST00000624796 1859 ntBASIC3.11□□□□□ -1.91
PRKDCP78527 RNA5SP241-201ENST00000391326 114 ntBASIC3.11□□□□□ -1.91
PRKDCP78527 AC021876.1-201ENST00000425959 359 ntBASIC3.11□□□□□ -1.91
PRKDCP78527 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.11□□□□□ -1.91
PRKDCP78527 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.11□□□□□ -1.91
PRKDCP78527 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.11□□□□□ -1.91
PRKDCP78527 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKDCP78527 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKDCP78527 AC092709.1-201ENST00000521355 1045 ntBASIC3.11□□□□□ -1.91
PRKDCP78527 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.11□□□□□ -1.91
PRKDCP78527 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRKDCP78527 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKDCP78527 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKDCP78527 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PRKDCP78527 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PRKDCP78527 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.1□□□□□ -1.91
PRKDCP78527 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 AL158827.1-201ENST00000416300 391 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 Y_RNA.673-201ENST00000516306 88 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.1□□□□□ -1.91
PRKDCP78527 AC008013.2-202ENST00000637965 364 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC3.1□□□□□ -1.91
PRKDCP78527 CASC19-261ENST00000641853 1638 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.1□□□□□ -1.91
PRKDCP78527 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PRKDCP78527 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 RNA5SP151-201ENST00000365632 117 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKDCP78527 RPEP2-201ENST00000432149 701 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 AL935212.3-201ENST00000450729 284 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKDCP78527 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 AC010486.1-201ENST00000511793 424 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 AC093853.1-201ENST00000515689 483 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 AC093388.1-201ENST00000609166 430 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PRKDCP78527 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.1□□□□□ -1.91
PRKDCP78527 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.1□□□□□ -1.91
PRKDCP78527 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PRKDCP78527 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 AC092681.1-201ENST00000297369 291 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 HSPE1P12-201ENST00000412576 301 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 AL590806.1-201ENST00000415818 853 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKDCP78527 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.1□□□□□ -1.91
PRKDCP78527 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.1□□□□□ -1.91
PRKDCP78527 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.1□□□□□ -1.91
PRKDCP78527 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKDCP78527 MIR7853-201ENST00000584820 132 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 MTCO3P22-201ENST00000603219 784 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 CR392039.4-201ENST00000624968 501 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKDCP78527 PRO1804-201ENST00000623780 2050 ntBASIC3.1□□□□□ -1.91
PRKDCP78527 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKDCP78527 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 OR11H4-201ENST00000315409 1082 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 TRIM60P17-201ENST00000415181 719 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 AC021193.1-201ENST00000511607 420 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 AC027667.1-201ENST00000545814 304 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.09□□□□□ -1.91
PRKDCP78527 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.09□□□□□ -1.91
PRKDCP78527 MIR6715A-201ENST00000615929 79 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PRKDCP78527 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC3.09□□□□□ -1.91
PRKDCP78527 AC083899.2-201ENST00000423285 1376 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.09□□□□□ -1.91
PRKDCP78527 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
PRKDCP78527 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PRKDCP78527 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 AL512326.1-201ENST00000443050 721 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms