Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLDN2P57739 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN2P57739 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN2P57739 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN2P57739 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN2P57739 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN2P57739 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN2P57739 METTL21EP-201ENST00000298105 713 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 RNA5SP443-201ENST00000363083 132 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 RNA5SP223-201ENST00000365174 120 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 RNU6-185P-201ENST00000384421 107 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN2P57739 MTCO2P8-201ENST00000412213 658 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AC105402.1-201ENST00000413336 545 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN2P57739 MTCO3P4-201ENST00000419236 787 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN2P57739 MGAT2P2-201ENST00000427194 797 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 NPM1P18-201ENST00000434232 732 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN2P57739 AL137845.2-201ENST00000444292 988 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AC112498.1-201ENST00000444401 332 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN2P57739 DUXAP8-207ENST00000456786 622 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 RN7SL443P-201ENST00000464331 290 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 RPS24P16-201ENST00000497294 392 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN2P57739 AC097486.1-201ENST00000515331 210 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN2P57739 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN2P57739 SEPT10P1-201ENST00000517342 1162 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AC021451.1-201ENST00000523498 1129 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AP001372.4-201ENST00000524889 472 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN2P57739 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN2P57739 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN2P57739 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN2P57739 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN2P57739 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN2P57739 AC009117.1-201ENST00000563948 554 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 MIR7853-201ENST00000584820 132 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AC012254.4-201ENST00000588843 273 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN2P57739 AC087283.1-201ENST00000604029 1074 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 DUXAP10-204ENST00000612052 616 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN2P57739 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN2P57739 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN2P57739 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CLDN2P57739 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CLDN2P57739 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN2P57739 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN2P57739 AC017007.4-201ENST00000503353 1352 ntBASIC5.04□□□□□ -1.6
CLDN2P57739 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN2P57739 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 SAMMSON-210ENST00000641260 1308 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
CLDN2P57739 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 AP001029.2-203ENST00000589795 4910 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
CLDN2P57739 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN2P57739 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 RN7SKP149-201ENST00000363008 344 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 SNORA56-201ENST00000383966 129 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 RNU6-452P-201ENST00000384406 107 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 RNU6-298P-201ENST00000390888 96 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 CYB5AP4-201ENST00000396692 399 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 AP000357.1-201ENST00000409926 1165 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 OR13Z1P-201ENST00000416141 834 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN2P57739 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN2P57739 RPL5P2-201ENST00000429598 854 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN2P57739 RPL19P16-201ENST00000433839 588 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 MTCO1P52-201ENST00000433928 531 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN2P57739 MED6P1-201ENST00000439659 713 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 IGHV5-78-201ENST00000450948 295 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 Z95152.1-201ENST00000453556 656 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN2P57739 RN7SL319P-201ENST00000480656 221 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 AC007686.1-201ENST00000488511 463 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN2P57739 AC026414.1-201ENST00000504046 698 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 MRPS33P2-201ENST00000507850 322 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 AC021193.1-201ENST00000511607 420 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 OR7H2P-201ENST00000513483 306 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN2P57739 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN2P57739 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.03□□□□□ -1.6
CLDN2P57739 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN2P57739 NMNAT1P1-201ENST00000554095 876 ntBASIC5.03□□□□□ -1.6
CLDN2P57739 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.03□□□□□ -1.6
CLDN2P57739 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms