Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.13□□□□□ -1.59
LIMK1P53667 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.13□□□□□ -1.59
LIMK1P53667 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
LIMK1P53667 AC007559.1-201ENST00000428736 355 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.13□□□□□ -1.59
LIMK1P53667 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.13□□□□□ -1.59
LIMK1P53667 AP000797.2-201ENST00000475768 606 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
LIMK1P53667 RN7SL423P-201ENST00000486202 304 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 AC016559.2-201ENST00000510759 359 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 AC108471.1-201ENST00000513977 287 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 RN7SKP253-201ENST00000516424 309 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 RN7SKP21-201ENST00000516503 220 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.13□□□□□ -1.59
LIMK1P53667 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.13□□□□□ -1.59
LIMK1P53667 AC079064.1-201ENST00000528365 362 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.13□□□□□ -1.59
LIMK1P53667 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.13□□□□□ -1.59
LIMK1P53667 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.13□□□□□ -1.59
LIMK1P53667 RN7SL356P-201ENST00000582228 248 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.13□□□□□ -1.59
LIMK1P53667 AC092474.3-201ENST00000603022 568 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.13□□□□□ -1.59
LIMK1P53667 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LIMK1P53667 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LIMK1P53667 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
LIMK1P53667 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LIMK1P53667 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
LIMK1P53667 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 THAP12P5-201ENST00000405864 2275 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.12□□□□□ -1.59
LIMK1P53667 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.12□□□□□ -1.59
LIMK1P53667 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.12□□□□□ -1.59
LIMK1P53667 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 RNU2-72P-201ENST00000411175 163 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC096921.1-201ENST00000411661 375 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 USP9YP19-201ENST00000412165 485 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 MTND2P11-201ENST00000423638 648 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.12□□□□□ -1.59
LIMK1P53667 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.12□□□□□ -1.59
LIMK1P53667 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 TCEA1P3-201ENST00000443005 880 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC112498.1-201ENST00000444401 332 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 OR52J1P-201ENST00000450596 932 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC104634.1-201ENST00000452720 462 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 RNU6-1218P-201ENST00000458990 108 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC093663.2-201ENST00000484625 313 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 RN7SL244P-201ENST00000493405 297 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC109464.1-201ENST00000511091 819 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC098976.1-201ENST00000513014 541 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMK1P53667 TVP23CP2-201ENST00000571473 623 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.12□□□□□ -1.59
LIMK1P53667 AL590392.1-201ENST00000604960 446 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 AC010200.2-201ENST00000605098 235 ntBASIC5.12□□□□□ -1.59
LIMK1P53667 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.12□□□□□ -1.59
LIMK1P53667 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.12□□□□□ -1.59
LIMK1P53667 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.12□□□□□ -1.59
LIMK1P53667 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMK1P53667 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 Z95327.2-201ENST00000414579 1873 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LIMK1P53667 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.11□□□□□ -1.59
LIMK1P53667 AC239868.2-201ENST00000564237 4527 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK1P53667 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms