Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 LSM3P2-201ENST00000551246 273 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AL359219.2-201ENST00000555184 348 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.85□□□□□ -1.63
PDX1P52945 AC122134.1-202ENST00000569111 1201 ntBASIC4.85□□□□□ -1.63
PDX1P52945 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.85□□□□□ -1.63
PDX1P52945 MIR1264-201ENST00000616374 69 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.85□□□□□ -1.63
PDX1P52945 AC138965.3-201ENST00000623875 498 ntBASIC4.85□□□□□ -1.63
PDX1P52945 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.85□□□□□ -1.63
PDX1P52945 AC006210.2-201ENST00000367074 1545 ntBASIC4.85□□□□□ -1.63
PDX1P52945 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.85□□□□□ -1.63
PDX1P52945 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.85□□□□□ -1.63
PDX1P52945 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PDX1P52945 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDX1P52945 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDX1P52945 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDX1P52945 AL603750.1-201ENST00000624216 1717 ntBASIC4.84□□□□□ -1.63
PDX1P52945 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.84□□□□□ -1.63
PDX1P52945 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDX1P52945 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDX1P52945 HMGB3P7-201ENST00000400214 611 ntBASIC4.84□□□□□ -1.63
PDX1P52945 Z97832.1-201ENST00000402490 328 ntBASIC4.84□□□□□ -1.63
PDX1P52945 RPS16P5-201ENST00000406501 404 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.84□□□□□ -1.63
PDX1P52945 AF186996.5-201ENST00000418098 904 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 MTND4LP13-201ENST00000425022 298 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.84□□□□□ -1.63
PDX1P52945 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.84□□□□□ -1.63
PDX1P52945 UBE2D3P3-201ENST00000426992 425 ntBASIC4.84□□□□□ -1.63
PDX1P52945 NDUFA5P10-201ENST00000432147 357 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.84□□□□□ -1.63
PDX1P52945 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 ARAFP2-201ENST00000440565 559 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 TCEA1P1-201ENST00000449716 880 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC245028.2-201ENST00000458673 253 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC092691.2-201ENST00000461787 803 ntBASIC4.84□□□□□ -1.63
PDX1P52945 RN7SL481P-201ENST00000477764 299 ntBASIC4.84□□□□□ -1.63
PDX1P52945 RN7SL319P-201ENST00000480656 221 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC092902.1-201ENST00000486999 259 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC093267.1-201ENST00000489176 961 ntBASIC4.84□□□□□ -1.63
PDX1P52945 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 RPL23AP72-201ENST00000492447 435 ntBASIC4.84□□□□□ -1.63
PDX1P52945 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDX1P52945 RNA5SP230-201ENST00000517039 122 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 MORF4L1P3-201ENST00000525966 950 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC113192.3-201ENST00000529152 742 ntBASIC4.84□□□□□ -1.63
PDX1P52945 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 AC008126.1-201ENST00000549019 480 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 AC023158.1-201ENST00000561632 1025 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.84□□□□□ -1.63
PDX1P52945 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.84□□□□□ -1.63
PDX1P52945 AC010503.3-201ENST00000594355 540 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC104687.2-201ENST00000604442 342 ntBASIC4.84□□□□□ -1.63
PDX1P52945 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.84□□□□□ -1.63
PDX1P52945 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.84□□□□□ -1.63
PDX1P52945 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PDX1P52945 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDX1P52945 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.84□□□□□ -1.64
PDX1P52945 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDX1P52945 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.84□□□□□ -1.64
PDX1P52945 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.83□□□□□ -1.64
PDX1P52945 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PDX1P52945 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PDX1P52945 PCAT14-202ENST00000627127 3935 ntBASIC4.83□□□□□ -1.64
PDX1P52945 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 MTCO1P7-201ENST00000419523 1542 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
PDX1P52945 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDX1P52945 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDX1P52945 GLULP6-201ENST00000399502 913 ntBASIC4.83□□□□□ -1.64
PDX1P52945 ATP5F1P6-201ENST00000402768 767 ntBASIC4.83□□□□□ -1.64
PDX1P52945 SNORA77-201ENST00000408716 125 ntBASIC4.83□□□□□ -1.64
PDX1P52945 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.83□□□□□ -1.64
PDX1P52945 AL590806.1-201ENST00000415818 853 ntBASIC4.83□□□□□ -1.64
PDX1P52945 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 BTF3P9-201ENST00000418784 283 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms