Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RPL7P50-201ENST00000600588 727 ntBASIC6.37□□□□□ -1.39
MSH6P52701 AL161756.2-201ENST00000604597 246 ntBASIC6.37□□□□□ -1.39
MSH6P52701 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.37□□□□□ -1.39
MSH6P52701 MIR8059-201ENST00000620427 81 ntBASIC6.37□□□□□ -1.39
MSH6P52701 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.37□□□□□ -1.39
MSH6P52701 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
MSH6P52701 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MSH6P52701 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MSH6P52701 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MSH6P52701 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
MSH6P52701 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
MSH6P52701 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MSH6P52701 MT-RNR1-201ENST00000389680 954 ntBASIC6.36□□□□□ -1.39
MSH6P52701 MTCO1P54-201ENST00000430139 712 ntBASIC6.36□□□□□ -1.39
MSH6P52701 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.36□□□□□ -1.39
MSH6P52701 AC007389.2-201ENST00000434630 306 ntBASIC6.36□□□□□ -1.39
MSH6P52701 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
MSH6P52701 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.36□□□□□ -1.39
MSH6P52701 RN7SL703P-201ENST00000578485 302 ntBASIC6.36□□□□□ -1.39
MSH6P52701 MIR4660-201ENST00000583549 74 ntBASIC6.36□□□□□ -1.39
MSH6P52701 AC017100.2-201ENST00000584628 355 ntBASIC6.36□□□□□ -1.39
MSH6P52701 MFSD8-242ENST00000641690 4199 ntBASIC6.36□□□□□ -1.39
MSH6P52701 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
MSH6P52701 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.36□□□□□ -1.39
MSH6P52701 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.36□□□□□ -1.39
MSH6P52701 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MSH6P52701 VN2R3P-201ENST00000422626 1412 ntBASIC6.36□□□□□ -1.39
MSH6P52701 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
MSH6P52701 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.35□□□□□ -1.39
MSH6P52701 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
MSH6P52701 SNORA63.1-201ENST00000362493 131 ntBASIC6.35□□□□□ -1.39
MSH6P52701 RNA5SP513-201ENST00000364648 118 ntBASIC6.35□□□□□ -1.39
MSH6P52701 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 U3.23-201ENST00000391132 200 ntBASIC6.35□□□□□ -1.39
MSH6P52701 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.35□□□□□ -1.39
MSH6P52701 RNU6ATAC-201ENST00000408749 126 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.35□□□□□ -1.39
MSH6P52701 HMGB3P5-201ENST00000428894 612 ntBASIC6.35□□□□□ -1.39
MSH6P52701 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.35□□□□□ -1.39
MSH6P52701 RPL7P33-201ENST00000444159 742 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AC091564.1-201ENST00000464563 479 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AC021660.1-201ENST00000465006 554 ntBASIC6.35□□□□□ -1.39
MSH6P52701 RPL23AP2-201ENST00000471227 466 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.35□□□□□ -1.39
MSH6P52701 AC146944.2-203ENST00000502493 354 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AC139495.1-202ENST00000513164 354 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.35□□□□□ -1.39
MSH6P52701 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.35□□□□□ -1.39
MSH6P52701 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.35□□□□□ -1.39
MSH6P52701 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.35□□□□□ -1.39
MSH6P52701 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.35□□□□□ -1.39
MSH6P52701 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.35□□□□□ -1.39
MSH6P52701 AC113403.1-201ENST00000604910 193 ntBASIC6.35□□□□□ -1.39
MSH6P52701 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 AC005899.7-201ENST00000618199 588 ntBASIC6.35□□□□□ -1.39
MSH6P52701 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 AC244100.1-202ENST00000621554 382 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AC039056.2-201ENST00000622261 511 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AC112484.5-201ENST00000624189 228 ntBASIC6.35□□□□□ -1.39
MSH6P52701 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.35□□□□□ -1.39
MSH6P52701 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
MSH6P52701 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.35□□□□□ -1.39
MSH6P52701 AC133552.1-201ENST00000569988 4007 ntBASIC6.35□□□□□ -1.39
MSH6P52701 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
MSH6P52701 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.35□□□□□ -1.39
MSH6P52701 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
MSH6P52701 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
MSH6P52701 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
MSH6P52701 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MSH6P52701 AL607077.1-201ENST00000401718 499 ntBASIC6.34□□□□□ -1.39
MSH6P52701 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.34□□□□□ -1.39
MSH6P52701 PCNPP4-201ENST00000414817 517 ntBASIC6.34□□□□□ -1.39
MSH6P52701 E2F6P2-201ENST00000420708 748 ntBASIC6.34□□□□□ -1.39
MSH6P52701 AC053481.1-201ENST00000467217 306 ntBASIC6.34□□□□□ -1.39
MSH6P52701 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.34□□□□□ -1.39
MSH6P52701 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.34□□□□□ -1.39
MSH6P52701 AL121834.1-201ENST00000572284 509 ntBASIC6.34□□□□□ -1.39
MSH6P52701 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.34□□□□□ -1.39
MSH6P52701 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.34□□□□□ -1.39
MSH6P52701 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.34□□□□□ -1.39
MSH6P52701 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.34□□□□□ -1.39
MSH6P52701 MIR6867-201ENST00000610636 67 ntBASIC6.34□□□□□ -1.39
MSH6P52701 AC011815.3-201ENST00000624194 473 ntBASIC6.34□□□□□ -1.39
MSH6P52701 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.34□□□□□ -1.39
MSH6P52701 ICE2P1-201ENST00000512800 1849 ntBASIC6.34□□□□□ -1.39
MSH6P52701 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
MSH6P52701 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MSH6P52701 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
MSH6P52701 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MSH6P52701 AC073136.1-201ENST00000449426 2884 ntBASIC6.34□□□□□ -1.39
MSH6P52701 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
MSH6P52701 AC011447.7-201ENST00000624228 1590 ntBASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms