Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
MTHFRP42898 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MTHFRP42898 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MTHFRP42898 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MTHFRP42898 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MTHFRP42898 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MTHFRP42898 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
MTHFRP42898 AC093535.2-201ENST00000624769 2326 ntBASIC5.29□□□□□ -1.56
MTHFRP42898 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.29□□□□□ -1.56
MTHFRP42898 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MTHFRP42898 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
MTHFRP42898 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
MTHFRP42898 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 AC099654.2-201ENST00000433031 1980 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 OR9G4-201ENST00000302957 984 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 AC068538.1-201ENST00000376856 336 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.28□□□□□ -1.56
MTHFRP42898 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.28□□□□□ -1.56
MTHFRP42898 AF186996.5-201ENST00000418098 904 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 MTND2P2-201ENST00000434633 945 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 SCAND3P1-201ENST00000439854 1060 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.28□□□□□ -1.56
MTHFRP42898 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 SLC25A18P1-201ENST00000449385 454 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 IGHV5-78-201ENST00000450948 295 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 AC010326.1-201ENST00000462726 602 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 RPL7P41-201ENST00000485823 957 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 AC026979.1-201ENST00000492525 396 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 MRPS33P2-201ENST00000507850 322 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 RNU6-889P-201ENST00000517189 103 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 AC009643.1-201ENST00000532030 391 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.28□□□□□ -1.56
MTHFRP42898 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.28□□□□□ -1.56
MTHFRP42898 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 AC005021.1-201ENST00000608730 355 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.28□□□□□ -1.56
MTHFRP42898 CFTRP2-201ENST00000634304 199 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 FRG1EP-201ENST00000634469 770 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.28□□□□□ -1.56
MTHFRP42898 CASC19-284ENST00000642142 1868 ntBASIC5.28□□□□□ -1.56
MTHFRP42898 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MTHFRP42898 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.28□□□□□ -1.56
MTHFRP42898 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
MTHFRP42898 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
MTHFRP42898 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MTHFRP42898 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.27□□□□□ -1.57
MTHFRP42898 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.27□□□□□ -1.57
MTHFRP42898 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MTHFRP42898 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.27□□□□□ -1.57
MTHFRP42898 RNA5SP191-201ENST00000362585 102 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
MTHFRP42898 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MTHFRP42898 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MTHFRP42898 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.27□□□□□ -1.57
MTHFRP42898 AL590609.2-201ENST00000421430 368 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.27□□□□□ -1.57
MTHFRP42898 CYCSP11-201ENST00000436426 315 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 RPL36AP15-201ENST00000444514 266 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 AC099063.2-201ENST00000446360 662 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
MTHFRP42898 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.27□□□□□ -1.57
MTHFRP42898 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.27□□□□□ -1.57
MTHFRP42898 AC021205.1-201ENST00000468797 348 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 AC103987.1-201ENST00000473394 348 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.27□□□□□ -1.57
MTHFRP42898 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.27□□□□□ -1.57
MTHFRP42898 AC111000.3-201ENST00000508057 576 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MTHFRP42898 AC021193.1-201ENST00000511607 420 ntBASIC5.27□□□□□ -1.57
MTHFRP42898 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms