Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 BTG4P1-201ENST00000510421 183 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 Y_RNA.719-201ENST00000517156 106 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 AC026616.1-201ENST00000523157 525 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM23P36406 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM23P36406 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM23P36406 AC063949.1-201ENST00000552900 865 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 AC006349.1-201ENST00000555526 235 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM23P36406 AC087283.1-201ENST00000604029 1074 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 MIR6780A-201ENST00000615089 68 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 BX005214.3-202ENST00000619809 325 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM23P36406 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM23P36406 SMG1P6-201ENST00000532337 2930 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 AC104623.2-202ENST00000623477 4002 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 AC008758.3-201ENST00000507003 1829 ntBASIC4.83□□□□□ -1.64
TRIM23P36406 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TRIM23P36406 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TRIM23P36406 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM23P36406 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 AC068446.1-201ENST00000556425 1549 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 VPS35P1-201ENST00000563400 1518 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 NCLP2-201ENST00000416078 1462 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM23P36406 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM23P36406 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM23P36406 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
TRIM23P36406 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 UBBP2-201ENST00000376781 231 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 AL512504.1-201ENST00000415494 778 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM23P36406 MTCYBP7-201ENST00000419540 1134 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM23P36406 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM23P36406 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM23P36406 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM23P36406 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 NDUFA5P1-201ENST00000433858 341 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM23P36406 CYCSP24-201ENST00000445119 316 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM23P36406 AC104629.2-201ENST00000468627 598 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM23P36406 BUD31P1-201ENST00000521828 359 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 RPL23AP53-201ENST00000521854 457 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM23P36406 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM23P36406 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM23P36406 AC090312.1-201ENST00000580637 348 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 MIR4270-201ENST00000581799 70 ntBASIC4.82□□□□□ -1.64
TRIM23P36406 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM23P36406 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM23P36406 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM23P36406 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM23P36406 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM23P36406 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM23P36406 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM23P36406 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM23P36406 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 AC063976.2-201ENST00000425667 3556 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM23P36406 RNU4-7P-201ENST00000364758 141 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM23P36406 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM23P36406 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM23P36406 IPMKP1-201ENST00000425988 855 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
TRIM23P36406 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM23P36406 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 AC073052.1-201ENST00000440417 714 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 RPL36AP15-201ENST00000444514 266 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM23P36406 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 ARL4AP1-201ENST00000503220 705 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 SCARNA22-201ENST00000503991 125 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 RN7SKP276-201ENST00000516242 268 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM23P36406 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 AP001880.2-201ENST00000538233 448 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 AC137768.1-201ENST00000549998 553 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 HMGB3P26-201ENST00000560051 582 ntBASIC4.81□□□□□ -1.64
TRIM23P36406 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM23P36406 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms