Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC091953.3-201ENST00000623220 236 ntBASIC4.59□□□□□ -1.67
RPA3P35244 AL391684.1-202ENST00000641293 1636 ntBASIC4.59□□□□□ -1.67
RPA3P35244 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.59□□□□□ -1.67
RPA3P35244 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
RPA3P35244 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RPA3P35244 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
RPA3P35244 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.58□□□□□ -1.68
RPA3P35244 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.58□□□□□ -1.68
RPA3P35244 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RPA3P35244 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
RPA3P35244 Z98755.1-201ENST00000407015 1384 ntBASIC4.58□□□□□ -1.68
RPA3P35244 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 RNA5SP52-201ENST00000362448 134 ntBASIC4.58□□□□□ -1.68
RPA3P35244 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.58□□□□□ -1.68
RPA3P35244 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RPA3P35244 BX510359.2-201ENST00000417920 305 ntBASIC4.58□□□□□ -1.68
RPA3P35244 AC004690.1-201ENST00000418216 328 ntBASIC4.58□□□□□ -1.68
RPA3P35244 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.58□□□□□ -1.68
RPA3P35244 AC016831.4-201ENST00000438302 307 ntBASIC4.58□□□□□ -1.68
RPA3P35244 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.58□□□□□ -1.68
RPA3P35244 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPA3P35244 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.58□□□□□ -1.68
RPA3P35244 OR11I1P-201ENST00000486033 954 ntBASIC4.58□□□□□ -1.68
RPA3P35244 SCARNA22-201ENST00000503991 125 ntBASIC4.58□□□□□ -1.68
RPA3P35244 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.58□□□□□ -1.68
RPA3P35244 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.58□□□□□ -1.68
RPA3P35244 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.58□□□□□ -1.68
RPA3P35244 AC023762.1-201ENST00000603280 584 ntBASIC4.58□□□□□ -1.68
RPA3P35244 AC010201.1-201ENST00000605051 540 ntBASIC4.58□□□□□ -1.68
RPA3P35244 AC100827.5-201ENST00000615883 426 ntBASIC4.58□□□□□ -1.68
RPA3P35244 NAMPTP1-201ENST00000440465 2514 ntBASIC4.58□□□□□ -1.68
RPA3P35244 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.58□□□□□ -1.68
RPA3P35244 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RPA3P35244 AC000123.3-201ENST00000624029 4975 ntBASIC4.57□□□□□ -1.68
RPA3P35244 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPA3P35244 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPA3P35244 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RPA3P35244 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPA3P35244 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPA3P35244 MAPK10-286ENST00000641208 8747 ntBASIC4.57□□□□□ -1.68
RPA3P35244 RN7SKP115-201ENST00000363177 317 ntBASIC4.57□□□□□ -1.68
RPA3P35244 RNU1-44P-201ENST00000384453 163 ntBASIC4.57□□□□□ -1.68
RPA3P35244 AL589994.1-201ENST00000404962 340 ntBASIC4.57□□□□□ -1.68
RPA3P35244 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.57□□□□□ -1.68
RPA3P35244 AC002524.1-201ENST00000411687 547 ntBASIC4.57□□□□□ -1.68
RPA3P35244 AL160275.2-201ENST00000412010 394 ntBASIC4.57□□□□□ -1.68
RPA3P35244 RSU1P3-201ENST00000412878 835 ntBASIC4.57□□□□□ -1.68
RPA3P35244 GTF2IP2-201ENST00000424290 697 ntBASIC4.57□□□□□ -1.68
RPA3P35244 CENPIP1-201ENST00000425713 902 ntBASIC4.57□□□□□ -1.68
RPA3P35244 DYNLL1P7-201ENST00000429273 258 ntBASIC4.57□□□□□ -1.68
RPA3P35244 AC005154.2-201ENST00000438110 379 ntBASIC4.57□□□□□ -1.68
RPA3P35244 RPL7P33-201ENST00000444159 742 ntBASIC4.57□□□□□ -1.68
RPA3P35244 H2AFZP5-201ENST00000446960 382 ntBASIC4.57□□□□□ -1.68
RPA3P35244 AL935212.3-201ENST00000450729 284 ntBASIC4.57□□□□□ -1.68
RPA3P35244 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RPA3P35244 AC098799.3-201ENST00000506095 438 ntBASIC4.57□□□□□ -1.68
RPA3P35244 OR7H2P-201ENST00000513483 306 ntBASIC4.57□□□□□ -1.68
RPA3P35244 RNU2-30P-201ENST00000516209 141 ntBASIC4.57□□□□□ -1.68
RPA3P35244 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.57□□□□□ -1.68
RPA3P35244 MTND2P17-201ENST00000550281 688 ntBASIC4.57□□□□□ -1.68
RPA3P35244 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.57□□□□□ -1.68
RPA3P35244 MIR4443-201ENST00000585052 53 ntBASIC4.57□□□□□ -1.68
RPA3P35244 AC103792.1-201ENST00000603591 919 ntBASIC4.57□□□□□ -1.68
RPA3P35244 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.57□□□□□ -1.68
RPA3P35244 MIR6853-201ENST00000619642 74 ntBASIC4.57□□□□□ -1.68
RPA3P35244 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPA3P35244 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RPA3P35244 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RPA3P35244 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
RPA3P35244 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.57□□□□□ -1.68
RPA3P35244 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RPA3P35244 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPA3P35244 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.56□□□□□ -1.68
RPA3P35244 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPA3P35244 RNU1-63P-201ENST00000383902 164 ntBASIC4.56□□□□□ -1.68
RPA3P35244 RNA5SP87-201ENST00000384155 118 ntBASIC4.56□□□□□ -1.68
RPA3P35244 MIR298-201ENST00000401212 88 ntBASIC4.56□□□□□ -1.68
RPA3P35244 RN7SKP267-201ENST00000410381 285 ntBASIC4.56□□□□□ -1.68
RPA3P35244 SNRPFP2-201ENST00000440710 251 ntBASIC4.56□□□□□ -1.68
RPA3P35244 GEMIN8P3-201ENST00000445417 720 ntBASIC4.56□□□□□ -1.68
RPA3P35244 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.56□□□□□ -1.68
RPA3P35244 AC108463.1-201ENST00000450258 347 ntBASIC4.56□□□□□ -1.68
RPA3P35244 ISCUP1-201ENST00000454451 448 ntBASIC4.56□□□□□ -1.68
RPA3P35244 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.56□□□□□ -1.68
RPA3P35244 AC006967.1-201ENST00000467608 589 ntBASIC4.56□□□□□ -1.68
RPA3P35244 AC231760.1-201ENST00000498002 260 ntBASIC4.56□□□□□ -1.68
RPA3P35244 AC105233.1-201ENST00000498840 781 ntBASIC4.56□□□□□ -1.68
RPA3P35244 AC015795.1-201ENST00000513669 327 ntBASIC4.56□□□□□ -1.68
RPA3P35244 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RPA3P35244 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RPA3P35244 AC008147.3-201ENST00000548666 354 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms