Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC12P31275 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC12P31275 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC12P31275 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC12P31275 AC069304.2-201ENST00000605154 435 ntBASIC5.84□□□□□ -1.47
HOXC12P31275 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC12P31275 AC012254.5-201ENST00000623573 478 ntBASIC5.84□□□□□ -1.47
HOXC12P31275 AC018692.2-201ENST00000624130 348 ntBASIC5.84□□□□□ -1.47
HOXC12P31275 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.84□□□□□ -1.47
HOXC12P31275 AC026634.1-201ENST00000634369 198 ntBASIC5.84□□□□□ -1.47
HOXC12P31275 AC244258.1-201ENST00000637553 1071 ntBASIC5.84□□□□□ -1.47
HOXC12P31275 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC12P31275 AKAP17BP-201ENST00000431706 2719 ntBASIC5.84□□□□□ -1.47
HOXC12P31275 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC12P31275 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC12P31275 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC12P31275 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC12P31275 UGT2B27P-201ENST00000505092 1620 ntBASIC5.84□□□□□ -1.47
HOXC12P31275 MTCO1P14-201ENST00000441695 1559 ntBASIC5.84□□□□□ -1.48
HOXC12P31275 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.84□□□□□ -1.48
HOXC12P31275 AL606537.1-201ENST00000607258 2011 ntBASIC5.84□□□□□ -1.48
HOXC12P31275 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HOXC12P31275 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.84□□□□□ -1.48
HOXC12P31275 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HOXC12P31275 AL136531.3-201ENST00000624378 3658 ntBASIC5.84□□□□□ -1.48
HOXC12P31275 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 AL137141.1-201ENST00000624622 4836 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 AC004520.1-201ENST00000608362 1413 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 PDZK1P1-202ENST00000425209 1350 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 AL139384.2-201ENST00000613809 3590 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 LINC01613-201ENST00000561476 2780 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 AL512646.1-201ENST00000269395 1077 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 OR9G4-201ENST00000302957 984 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 RNU6-115P-201ENST00000364310 107 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 RNA5SP512-201ENST00000364550 120 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 PSMA6P1-201ENST00000400275 741 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 AL389915.1-201ENST00000422463 466 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 TVP23CP1-201ENST00000450317 639 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AL133244.1-201ENST00000456007 258 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 RPL7AP52-201ENST00000458096 790 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 RN7SL362P-201ENST00000494228 267 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 MTCYBP17-201ENST00000503579 789 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 HMGN1P16-201ENST00000508308 283 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC12P31275 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 EIF4A2P5-201ENST00000529914 499 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC12P31275 AL162632.2-201ENST00000553933 399 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 AC122134.1-201ENST00000565664 1104 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC12P31275 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 VN1R84P-201ENST00000593697 235 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC063977.7-201ENST00000594454 337 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 BNIP3P30-201ENST00000601184 574 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC119501.1-201ENST00000603646 475 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 TAS2R6P-201ENST00000605022 826 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC12P31275 AC027807.2-201ENST00000616099 408 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC073862.4-201ENST00000622982 854 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 CDRT1-208ENST00000630868 794 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.83□□□□□ -1.48
HOXC12P31275 OR52B5P-202ENST00000641118 1110 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms