Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL049830.4-201ENST00000555149 351 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HOXA9P31269 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXA9P31269 MIR4472-2-201ENST00000582069 67 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 MIR3936-201ENST00000584304 110 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXA9P31269 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXA9P31269 AL121890.3-201ENST00000618494 516 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 AP000648.2-201ENST00000624182 404 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXA9P31269 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HOXA9P31269 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA9P31269 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HOXA9P31269 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA9P31269 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA9P31269 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA9P31269 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA9P31269 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA9P31269 Z95331.1-201ENST00000623075 23112 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXA9P31269 RN7SKP74-201ENST00000362849 309 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXA9P31269 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 OR13Z1P-201ENST00000416141 834 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 AL356387.2-201ENST00000422272 243 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 AC004975.1-201ENST00000428733 208 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 RPL35AP21-201ENST00000437667 333 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXA9P31269 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 AL450263.2-201ENST00000439400 589 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 BTF3P6-201ENST00000448054 499 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 NUTF2P7-201ENST00000453086 375 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 RPL23AP24-201ENST00000458203 385 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 AC109327.1-201ENST00000471666 403 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 AC104763.1-201ENST00000475274 360 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXA9P31269 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXA9P31269 AC138701.1-201ENST00000524329 714 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 OR8A2P-201ENST00000528631 952 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXA9P31269 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 QTRT1P1-201ENST00000604344 1078 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 AC090948.1-201ENST00000607464 549 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 AC011944.2-201ENST00000624440 683 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA9P31269 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 PCAT14-202ENST00000627127 3935 ntBASIC4.89□□□□□ -1.63
HOXA9P31269 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA9P31269 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXA9P31269 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 AC108467.2-201ENST00000617640 1597 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 AC091046.3-201ENST00000631455 1574 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 OR1F12-201ENST00000402365 945 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA9P31269 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA9P31269 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA9P31269 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXA9P31269 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA9P31269 TPT1P1-201ENST00000458495 518 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 SCARNA10-201ENST00000459255 330 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 AC010618.1-201ENST00000469924 477 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 AL161747.1-201ENST00000480068 358 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA9P31269 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA9P31269 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HOXA9P31269 BNIP3P5-201ENST00000562290 498 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 AC122134.1-201ENST00000565664 1104 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 AC023575.1-201ENST00000580510 358 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 KPNA2P3-201ENST00000584190 848 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms