Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC093775.1-201ENST00000624154 1868 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 MIR16-2-201ENST00000362117 81 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 RNU6-225P-201ENST00000384613 103 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC105402.1-201ENST00000413336 545 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC092570.3-201ENST00000420113 693 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AL512661.1-201ENST00000434586 1253 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 RPL34P20-201ENST00000442771 351 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 OR7E125P-201ENST00000443450 846 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 RPS27P5-201ENST00000444247 244 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC108161.1-201ENST00000461060 402 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC015908.1-201ENST00000478739 476 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC112206.4-201ENST00000515142 405 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 SNORA31.13-201ENST00000516624 135 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 CR383656.6-201ENST00000550518 394 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC006349.1-201ENST00000555526 235 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 BGLT3-201ENST00000564523 994 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC023813.4-201ENST00000607580 580 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 MIR6798-201ENST00000612887 67 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AP003497.2-201ENST00000624220 967 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 HSPA8P14-201ENST00000552265 1805 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AL592494.2-201ENST00000425455 1548 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 AC012618.3-205ENST00000637896 1496 ntBASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB40ALP0C0E4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 MTND5P11-201ENST00000511037 1812 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 OR9K1P-202ENST00000641111 3217 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 RNU4-27P-201ENST00000410889 139 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 Y_RNA.625-201ENST00000411256 107 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 CTSL3P-202ENST00000412179 788 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 OR5M12P-201ENST00000423388 929 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 FO393419.3-201ENST00000428741 282 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AL035458.1-201ENST00000433096 585 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 RHOT1P3-201ENST00000436571 331 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 RPL34P26-201ENST00000445636 354 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 CASP3P1-201ENST00000446037 609 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 CLIC4P1-201ENST00000453177 535 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 RPS20P4-201ENST00000461659 355 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 RN7SL443P-201ENST00000464331 290 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 RN7SL814P-201ENST00000487715 300 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 RN7SL591P-201ENST00000496150 292 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC016550.1-201ENST00000505348 785 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 HMGN1P15-201ENST00000513870 295 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC108471.1-201ENST00000513977 287 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC021006.3-201ENST00000530771 192 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC027369.5-201ENST00000533838 755 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC009117.1-201ENST00000563948 554 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC022884.3-201ENST00000579571 248 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC105254.2-201ENST00000603636 436 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 MEMO1P5-201ENST00000604810 406 ntBASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB40ALP0C0E4 AC095038.2-201ENST00000621464 1070 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms