Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FREM3P0C091 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
FREM3P0C091 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
FREM3P0C091 AL158163.1-201ENST00000603915 1649 ntBASIC4.08□□□□□ -1.76
FREM3P0C091 MAPK10-263ENST00000641052 4307 ntBASIC4.08□□□□□ -1.76
FREM3P0C091 CYCSP42-201ENST00000450823 238 ntBASIC4.08□□□□□ -1.76
FREM3P0C091 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.08□□□□□ -1.76
FREM3P0C091 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.08□□□□□ -1.76
FREM3P0C091 AK3P4-201ENST00000504283 583 ntBASIC4.08□□□□□ -1.76
FREM3P0C091 AP002981.1-201ENST00000517692 975 ntBASIC4.08□□□□□ -1.76
FREM3P0C091 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.08□□□□□ -1.76
FREM3P0C091 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.08□□□□□ -1.76
FREM3P0C091 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.08□□□□□ -1.76
FREM3P0C091 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.08□□□□□ -1.76
FREM3P0C091 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.08□□□□□ -1.76
FREM3P0C091 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.08□□□□□ -1.76
FREM3P0C091 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FREM3P0C091 MUC2-202ENST00000613187 4845 ntBASIC4.08□□□□□ -1.76
FREM3P0C091 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
FREM3P0C091 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FREM3P0C091 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FREM3P0C091 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FREM3P0C091 MIR195-201ENST00000385194 87 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 RNU6-316P-201ENST00000391027 107 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 RPL7AP25-201ENST00000423357 805 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 RPL12P34-201ENST00000424532 479 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 FTH1P16-201ENST00000435241 552 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 AL161722.1-201ENST00000446972 1032 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.07□□□□□ -1.76
FREM3P0C091 RPS27AP17-201ENST00000463344 455 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.07□□□□□ -1.76
FREM3P0C091 AC026782.2-201ENST00000510845 636 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 CYCSP28-201ENST00000534284 321 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.07□□□□□ -1.76
FREM3P0C091 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.07□□□□□ -1.76
FREM3P0C091 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
FREM3P0C091 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 OR56B2P-202ENST00000641377 2453 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
FREM3P0C091 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 ICE2P1-201ENST00000512800 1849 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 AL356317.1-201ENST00000396110 1436 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 A2MP1-204ENST00000566278 4130 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 IGKV7-3-201ENST00000357453 298 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 MIR298-201ENST00000401212 88 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.07□□□□□ -1.76
FREM3P0C091 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.07□□□□□ -1.76
FREM3P0C091 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.07□□□□□ -1.76
FREM3P0C091 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.07□□□□□ -1.76
FREM3P0C091 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.07□□□□□ -1.76
FREM3P0C091 AC009643.1-201ENST00000532030 391 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
FREM3P0C091 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.07□□□□□ -1.76
FREM3P0C091 RN7SL176P-201ENST00000580352 264 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 AC005899.7-201ENST00000618199 588 ntBASIC4.07□□□□□ -1.76
FREM3P0C091 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FREM3P0C091 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.06□□□□□ -1.76
FREM3P0C091 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.06□□□□□ -1.76
FREM3P0C091 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.06□□□□□ -1.76
FREM3P0C091 OR5P1P-201ENST00000299512 925 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 SNRPFP1-201ENST00000414761 252 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AC062016.2-201ENST00000420950 676 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 ACTR3P2-201ENST00000439585 1257 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.06□□□□□ -1.76
FREM3P0C091 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.06□□□□□ -1.76
FREM3P0C091 RN7SL98P-201ENST00000462271 300 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 RPL23AP65-201ENST00000475608 468 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.06□□□□□ -1.76
FREM3P0C091 DEFB109F-201ENST00000491870 277 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.06□□□□□ -1.76
FREM3P0C091 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 AC091178.1-203ENST00000584586 279 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.06□□□□□ -1.76
FREM3P0C091 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.06□□□□□ -1.76
FREM3P0C091 AL354984.3-201ENST00000604803 325 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AL353726.1-201ENST00000614041 1000 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AL121890.3-201ENST00000618494 516 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 AC005261.6-201ENST00000623072 1387 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.06□□□□□ -1.76
FREM3P0C091 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms