Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC079148.1-201ENST00000565944 819 ntBASIC5.36□□□□□ -1.55
RB1P06400 AC019322.1-201ENST00000571869 389 ntBASIC5.36□□□□□ -1.55
RB1P06400 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.36□□□□□ -1.55
RB1P06400 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.36□□□□□ -1.55
RB1P06400 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.36□□□□□ -1.55
RB1P06400 AC005377.1-201ENST00000605126 456 ntBASIC5.36□□□□□ -1.55
RB1P06400 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.36□□□□□ -1.55
RB1P06400 MIR1264-201ENST00000616374 69 ntBASIC5.36□□□□□ -1.55
RB1P06400 AL121890.2-201ENST00000617644 465 ntBASIC5.36□□□□□ -1.55
RB1P06400 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 DHX40P1-201ENST00000588725 1412 ntBASIC5.36□□□□□ -1.55
RB1P06400 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.36□□□□□ -1.55
RB1P06400 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RB1P06400 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 KARSP3-201ENST00000571212 1504 ntBASIC5.35□□□□□ -1.55
RB1P06400 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RB1P06400 AL034374.1-201ENST00000406329 351 ntBASIC5.35□□□□□ -1.55
RB1P06400 GTF2IP5-201ENST00000414608 731 ntBASIC5.35□□□□□ -1.55
RB1P06400 AL121882.1-201ENST00000422893 417 ntBASIC5.35□□□□□ -1.55
RB1P06400 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.35□□□□□ -1.55
RB1P06400 HSPE1P16-201ENST00000426640 348 ntBASIC5.35□□□□□ -1.55
RB1P06400 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 AC009238.2-201ENST00000431026 355 ntBASIC5.35□□□□□ -1.55
RB1P06400 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.35□□□□□ -1.55
RB1P06400 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.35□□□□□ -1.55
RB1P06400 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.35□□□□□ -1.55
RB1P06400 AL591623.2-201ENST00000449978 222 ntBASIC5.35□□□□□ -1.55
RB1P06400 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.35□□□□□ -1.55
RB1P06400 AL356981.1-201ENST00000454879 684 ntBASIC5.35□□□□□ -1.55
RB1P06400 AC116562.1-201ENST00000485355 781 ntBASIC5.35□□□□□ -1.55
RB1P06400 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.35□□□□□ -1.55
RB1P06400 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.35□□□□□ -1.55
RB1P06400 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 AC108120.2-201ENST00000512973 294 ntBASIC5.35□□□□□ -1.55
RB1P06400 RNU6-1308P-201ENST00000516817 103 ntBASIC5.35□□□□□ -1.55
RB1P06400 SOX5P1-201ENST00000524155 1127 ntBASIC5.35□□□□□ -1.55
RB1P06400 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.35□□□□□ -1.55
RB1P06400 AP001880.2-201ENST00000538233 448 ntBASIC5.35□□□□□ -1.55
RB1P06400 CBX3P2-202ENST00000583365 535 ntBASIC5.35□□□□□ -1.55
RB1P06400 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.35□□□□□ -1.55
RB1P06400 MIR6133-201ENST00000617057 108 ntBASIC5.35□□□□□ -1.55
RB1P06400 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
RB1P06400 AP001005.3-201ENST00000622049 129 ntBASIC5.35□□□□□ -1.55
RB1P06400 AC090617.9-201ENST00000623751 147 ntBASIC5.35□□□□□ -1.55
RB1P06400 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.35□□□□□ -1.55
RB1P06400 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RB1P06400 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.35□□□□□ -1.55
RB1P06400 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RB1P06400 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RB1P06400 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RB1P06400 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RB1P06400 SOCS5P3-201ENST00000425115 1576 ntBASIC5.34□□□□□ -1.55
RB1P06400 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RB1P06400 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RB1P06400 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.34□□□□□ -1.55
RB1P06400 SNORA2.3-201ENST00000383920 135 ntBASIC5.34□□□□□ -1.55
RB1P06400 OR51A6P-201ENST00000418680 1004 ntBASIC5.34□□□□□ -1.55
RB1P06400 OR6K4P-201ENST00000423179 955 ntBASIC5.34□□□□□ -1.55
RB1P06400 OR5M12P-201ENST00000423388 929 ntBASIC5.34□□□□□ -1.55
RB1P06400 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.34□□□□□ -1.55
RB1P06400 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.34□□□□□ -1.55
RB1P06400 AC012497.1-201ENST00000429392 575 ntBASIC5.34□□□□□ -1.55
RB1P06400 AL136231.1-201ENST00000429407 730 ntBASIC5.34□□□□□ -1.55
RB1P06400 BX323845.1-201ENST00000432417 179 ntBASIC5.34□□□□□ -1.55
RB1P06400 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.34□□□□□ -1.55
RB1P06400 AC005154.2-201ENST00000438110 379 ntBASIC5.34□□□□□ -1.55
RB1P06400 AC016772.1-201ENST00000444170 1261 ntBASIC5.34□□□□□ -1.55
RB1P06400 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.34□□□□□ -1.55
RB1P06400 IGBP1P4-201ENST00000503202 879 ntBASIC5.34□□□□□ -1.55
RB1P06400 HAUS1P1-201ENST00000505275 832 ntBASIC5.34□□□□□ -1.55
RB1P06400 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.34□□□□□ -1.55
RB1P06400 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.34□□□□□ -1.55
RB1P06400 RNU6-1102P-201ENST00000516149 96 ntBASIC5.34□□□□□ -1.55
RB1P06400 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RB1P06400 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.34□□□□□ -1.55
RB1P06400 AC090079.2-201ENST00000575289 768 ntBASIC5.34□□□□□ -1.55
RB1P06400 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.34□□□□□ -1.55
RB1P06400 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.34□□□□□ -1.55
RB1P06400 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms