Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC004690.1-201ENST00000418216 328 ntBASIC5.11□□□□□ -1.59
VTNP04004 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.11□□□□□ -1.59
VTNP04004 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.11□□□□□ -1.59
VTNP04004 CHIAP3-201ENST00000423668 1133 ntBASIC5.11□□□□□ -1.59
VTNP04004 AJ239321.1-201ENST00000424255 564 ntBASIC5.11□□□□□ -1.59
VTNP04004 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.11□□□□□ -1.59
VTNP04004 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.11□□□□□ -1.59
VTNP04004 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.11□□□□□ -1.59
VTNP04004 AC004938.1-201ENST00000438468 308 ntBASIC5.11□□□□□ -1.59
VTNP04004 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.11□□□□□ -1.59
VTNP04004 YWHAZP2-201ENST00000440317 728 ntBASIC5.11□□□□□ -1.59
VTNP04004 AL500527.1-201ENST00000448532 255 ntBASIC5.11□□□□□ -1.59
VTNP04004 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.11□□□□□ -1.59
VTNP04004 RPL7AP10-201ENST00000481016 791 ntBASIC5.11□□□□□ -1.59
VTNP04004 AC093267.1-201ENST00000489176 961 ntBASIC5.11□□□□□ -1.59
VTNP04004 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.11□□□□□ -1.59
VTNP04004 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.11□□□□□ -1.59
VTNP04004 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.11□□□□□ -1.59
VTNP04004 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.11□□□□□ -1.59
VTNP04004 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.11□□□□□ -1.59
VTNP04004 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.11□□□□□ -1.59
VTNP04004 AL356218.2-201ENST00000605264 187 ntBASIC5.11□□□□□ -1.59
VTNP04004 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.11□□□□□ -1.59
VTNP04004 AL133243.1-201ENST00000614487 366 ntBASIC5.11□□□□□ -1.59
VTNP04004 AC104307.1-201ENST00000616142 196 ntBASIC5.11□□□□□ -1.59
VTNP04004 AC015804.1-201ENST00000622935 435 ntBASIC5.11□□□□□ -1.59
VTNP04004 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.11□□□□□ -1.59
VTNP04004 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
VTNP04004 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 OR56B2P-202ENST00000641377 2453 ntBASIC5.11□□□□□ -1.59
VTNP04004 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
VTNP04004 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.1□□□□□ -1.59
VTNP04004 AC008549.2-201ENST00000333482 706 ntBASIC5.1□□□□□ -1.59
VTNP04004 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VTNP04004 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VTNP04004 AC068538.1-201ENST00000376856 336 ntBASIC5.1□□□□□ -1.59
VTNP04004 AL034370.1-201ENST00000397254 1590 ntBASIC5.1□□□□□ -1.59
VTNP04004 Z98745.1-201ENST00000402553 494 ntBASIC5.1□□□□□ -1.59
VTNP04004 AL139039.2-201ENST00000407436 479 ntBASIC5.1□□□□□ -1.59
VTNP04004 RAB9AP4-201ENST00000415230 609 ntBASIC5.1□□□□□ -1.59
VTNP04004 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.1□□□□□ -1.59
VTNP04004 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.1□□□□□ -1.59
VTNP04004 RCC2P2-201ENST00000422174 918 ntBASIC5.1□□□□□ -1.59
VTNP04004 RPL7AP25-201ENST00000423357 805 ntBASIC5.1□□□□□ -1.59
VTNP04004 HMGN2P27-201ENST00000427352 270 ntBASIC5.1□□□□□ -1.59
VTNP04004 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.1□□□□□ -1.59
VTNP04004 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VTNP04004 AL161722.1-201ENST00000446972 1032 ntBASIC5.1□□□□□ -1.59
VTNP04004 RPS23P7-201ENST00000466210 444 ntBASIC5.1□□□□□ -1.59
VTNP04004 AC025164.1-201ENST00000496249 478 ntBASIC5.1□□□□□ -1.59
VTNP04004 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.1□□□□□ -1.59
VTNP04004 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
VTNP04004 AC025674.1-201ENST00000507074 324 ntBASIC5.1□□□□□ -1.59
VTNP04004 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.1□□□□□ -1.59
VTNP04004 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.1□□□□□ -1.59
VTNP04004 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.1□□□□□ -1.59
VTNP04004 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.1□□□□□ -1.59
VTNP04004 AC008126.1-201ENST00000549019 480 ntBASIC5.1□□□□□ -1.59
VTNP04004 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.1□□□□□ -1.59
VTNP04004 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.1□□□□□ -1.59
VTNP04004 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.1□□□□□ -1.59
VTNP04004 MIR4660-201ENST00000583549 74 ntBASIC5.1□□□□□ -1.59
VTNP04004 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.1□□□□□ -1.59
VTNP04004 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.1□□□□□ -1.59
VTNP04004 AL583832.1-201ENST00000603227 784 ntBASIC5.1□□□□□ -1.59
VTNP04004 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.1□□□□□ -1.59
VTNP04004 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.1□□□□□ -1.59
VTNP04004 AC073592.7-201ENST00000623659 507 ntBASIC5.1□□□□□ -1.59
VTNP04004 AC011815.3-201ENST00000624194 473 ntBASIC5.1□□□□□ -1.59
VTNP04004 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VTNP04004 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTNP04004 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VTNP04004 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.09□□□□□ -1.59
VTNP04004 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
VTNP04004 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VTNP04004 AL445487.1-201ENST00000415694 1580 ntBASIC5.09□□□□□ -1.59
VTNP04004 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTNP04004 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.09□□□□□ -1.59
VTNP04004 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.09□□□□□ -1.59
VTNP04004 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VTNP04004 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.09□□□□□ -1.59
VTNP04004 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTNP04004 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTNP04004 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.09□□□□□ -1.59
VTNP04004 RNU4-25P-201ENST00000410569 230 ntBASIC5.09□□□□□ -1.59
VTNP04004 AL592293.2-201ENST00000422292 996 ntBASIC5.09□□□□□ -1.59
VTNP04004 AL356806.1-201ENST00000422524 916 ntBASIC5.09□□□□□ -1.59
VTNP04004 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.09□□□□□ -1.59
VTNP04004 EIF4HP2-201ENST00000424380 563 ntBASIC5.09□□□□□ -1.59
VTNP04004 MTCO1P51-201ENST00000427672 1060 ntBASIC5.09□□□□□ -1.59
VTNP04004 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.09□□□□□ -1.59
VTNP04004 SNRPFP2-201ENST00000440710 251 ntBASIC5.09□□□□□ -1.59
VTNP04004 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.09□□□□□ -1.59
VTNP04004 EIF2S2P2-201ENST00000447161 982 ntBASIC5.09□□□□□ -1.59
VTNP04004 BTF3P6-201ENST00000448054 499 ntBASIC5.09□□□□□ -1.59
VTNP04004 RPL31P53-201ENST00000457065 348 ntBASIC5.09□□□□□ -1.59
VTNP04004 SCARNA10-201ENST00000459255 330 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms