Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CHRNA1P02708 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA1P02708 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA1P02708 AC018442.3-201ENST00000523025 183 ntBASIC5.16□□□□□ -1.58
CHRNA1P02708 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA1P02708 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA1P02708 DUX4L52-201ENST00000549363 777 ntBASIC5.16□□□□□ -1.58
CHRNA1P02708 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA1P02708 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA1P02708 AGGF1P9-201ENST00000561884 913 ntBASIC5.16□□□□□ -1.58
CHRNA1P02708 AC008782.1-201ENST00000603386 430 ntBASIC5.16□□□□□ -1.58
CHRNA1P02708 AC068831.8-201ENST00000620171 435 ntBASIC5.16□□□□□ -1.58
CHRNA1P02708 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA1P02708 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA1P02708 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA1P02708 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA1P02708 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA1P02708 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA1P02708 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA1P02708 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA1P02708 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA1P02708 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA1P02708 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA1P02708 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CHRNA1P02708 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA1P02708 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA1P02708 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA1P02708 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
CHRNA1P02708 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA1P02708 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA1P02708 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA1P02708 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA1P02708 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 VDAC1P6-201ENST00000430062 855 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNA1P02708 YWHAZP2-201ENST00000440317 728 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA1P02708 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 AP000942.1-201ENST00000463969 747 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 AC011276.1-201ENST00000469688 323 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 AL161747.1-201ENST00000480068 358 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 AGGF1P3-201ENST00000493675 1213 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 AC073073.1-201ENST00000493920 463 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 OR8A2P-201ENST00000528631 952 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA1P02708 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CHRNA1P02708 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.15□□□□□ -1.59
CHRNA1P02708 AL121839.1-201ENST00000556233 1185 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 AC115286.1-201ENST00000604298 434 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA1P02708 AL158062.1-201ENST00000619632 745 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
CHRNA1P02708 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA1P02708 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
CHRNA1P02708 ZFRP1-201ENST00000457579 2970 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA1P02708 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNA1P02708 ZNF137P-201ENST00000456718 1920 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 OR14L1P-202ENST00000641545 3009 ntBASIC5.15□□□□□ -1.59
CHRNA1P02708 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CHRNA1P02708 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA1P02708 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.59
CHRNA1P02708 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CHRNA1P02708 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.14□□□□□ -1.59
CHRNA1P02708 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNA1P02708 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CHRNA1P02708 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 AL590762.2-201ENST00000395798 571 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 RN7SKP247-201ENST00000411094 308 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNA1P02708 AL356981.1-201ENST00000454879 684 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNA1P02708 AC007016.1-201ENST00000512110 244 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 RPL23AP53-201ENST00000521854 457 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNA1P02708 AP001804.2-201ENST00000533932 910 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 TOMM20P2-201ENST00000540082 421 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.14□□□□□ -1.59
CHRNA1P02708 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CHRNA1P02708 AC011270.1-201ENST00000558606 583 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNA1P02708 MIR4472-2-201ENST00000582069 67 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 KPNA2P3-201ENST00000584190 848 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 AC020910.2-201ENST00000603635 610 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 AL133338.2-201ENST00000604292 736 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 AC073137.1-201ENST00000605636 634 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.14□□□□□ -1.59
CHRNA1P02708 U3.53-201ENST00000628922 216 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 AC006453.5-201ENST00000636451 619 ntBASIC5.14□□□□□ -1.59
CHRNA1P02708 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CHRNA1P02708 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms