Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.72□□□□□ -1.65
CLPTM1O96005 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.72□□□□□ -1.65
CLPTM1O96005 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.72□□□□□ -1.65
CLPTM1O96005 ATP5LP3-201ENST00000514223 304 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.72□□□□□ -1.65
CLPTM1O96005 SNORA76.2-201ENST00000517095 137 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.72□□□□□ -1.65
CLPTM1O96005 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.72□□□□□ -1.65
CLPTM1O96005 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.72□□□□□ -1.65
CLPTM1O96005 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.72□□□□□ -1.65
CLPTM1O96005 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.72□□□□□ -1.65
CLPTM1O96005 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.72□□□□□ -1.65
CLPTM1O96005 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.72□□□□□ -1.65
CLPTM1O96005 OSBPL9P3-201ENST00000534523 595 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLPTM1O96005 DYNLL1P4-201ENST00000549314 266 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLPTM1O96005 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.72□□□□□ -1.65
CLPTM1O96005 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.72□□□□□ -1.65
CLPTM1O96005 SUGT1P3-202ENST00000604259 383 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC015922.4-201ENST00000612568 690 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC104763.3-201ENST00000613765 618 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC005840.5-201ENST00000619166 599 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC095038.2-201ENST00000621464 1070 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC009269.6-201ENST00000621778 588 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC140113.4-201ENST00000622087 222 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 MIR8080-201ENST00000622224 89 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.72□□□□□ -1.65
CLPTM1O96005 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLPTM1O96005 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLPTM1O96005 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLPTM1O96005 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.72□□□□□ -1.65
CLPTM1O96005 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLPTM1O96005 AL592182.3-201ENST00000642132 3304 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLPTM1O96005 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.72□□□□□ -1.65
CLPTM1O96005 MAPK10-304ENST00000641341 3984 ntBASIC4.72□□□□□ -1.65
CLPTM1O96005 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CLPTM1O96005 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLPTM1O96005 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLPTM1O96005 AL359922.3-201ENST00000624779 1670 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLPTM1O96005 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLPTM1O96005 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLPTM1O96005 AL035405.1-201ENST00000400795 710 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC069282.1-201ENST00000411911 526 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC004448.2-201ENST00000422360 586 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.71□□□□□ -1.66
CLPTM1O96005 RPS27P18-201ENST00000431701 247 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 CLUHP1-201ENST00000435012 1190 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC243772.1-201ENST00000451620 410 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.71□□□□□ -1.66
CLPTM1O96005 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC108693.1-201ENST00000496068 432 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC112198.4-201ENST00000515450 351 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC103833.1-201ENST00000517442 172 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.71□□□□□ -1.66
CLPTM1O96005 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC125612.1-201ENST00000547580 377 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 NOP56P3-201ENST00000549457 385 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC116553.2-201ENST00000564203 463 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 ATP5J2P6-201ENST00000565203 266 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 MIR4489-201ENST00000578869 62 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC004775.1-201ENST00000607389 753 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC091979.2-201ENST00000607514 214 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC000068.2-201ENST00000608816 460 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AP000864.1-201ENST00000609424 650 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC109309.2-201ENST00000612597 332 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC022467.1-201ENST00000614738 749 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLPTM1O96005 AC234782.5-201ENST00000617723 324 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC005086.4-201ENST00000623065 213 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 AC055839.1-201ENST00000634467 498 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 OR5AC4P-202ENST00000642086 985 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLPTM1O96005 MAPK10-303ENST00000641324 3959 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLPTM1O96005 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 HSPA8P19-201ENST00000505359 1517 ntBASIC4.71□□□□□ -1.66
CLPTM1O96005 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.71□□□□□ -1.66
CLPTM1O96005 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLPTM1O96005 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
CLPTM1O96005 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLPTM1O96005 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLPTM1O96005 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLPTM1O96005 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms