Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 AL359219.2-201ENST00000555184 348 ntBASIC5.84□□□□□ -1.47
MBD4O95243 SS18L2P2-201ENST00000583960 235 ntBASIC5.84□□□□□ -1.47
MBD4O95243 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.84□□□□□ -1.47
MBD4O95243 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.84□□□□□ -1.47
MBD4O95243 AC010424.2-201ENST00000607594 443 ntBASIC5.84□□□□□ -1.47
MBD4O95243 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.84□□□□□ -1.47
MBD4O95243 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 AC002525.1-201ENST00000624392 1622 ntBASIC5.84□□□□□ -1.47
MBD4O95243 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
MBD4O95243 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
MBD4O95243 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
MBD4O95243 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
MBD4O95243 AC009643.2-201ENST00000603543 1448 ntBASIC5.83□□□□□ -1.48
MBD4O95243 AC093591.2-201ENST00000565254 3843 ntBASIC5.83□□□□□ -1.48
MBD4O95243 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
MBD4O95243 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MBD4O95243 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MBD4O95243 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MBD4O95243 AL353692.2-201ENST00000407054 335 ntBASIC5.83□□□□□ -1.48
MBD4O95243 OR5M12P-201ENST00000423388 929 ntBASIC5.83□□□□□ -1.48
MBD4O95243 CYCSP24-201ENST00000445119 316 ntBASIC5.83□□□□□ -1.48
MBD4O95243 CASP3P1-201ENST00000446037 609 ntBASIC5.83□□□□□ -1.48
MBD4O95243 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.83□□□□□ -1.48
MBD4O95243 AL356981.1-201ENST00000454879 684 ntBASIC5.83□□□□□ -1.48
MBD4O95243 SYT14P1-201ENST00000481459 721 ntBASIC5.83□□□□□ -1.48
MBD4O95243 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.83□□□□□ -1.48
MBD4O95243 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.83□□□□□ -1.48
MBD4O95243 AC025768.1-201ENST00000510057 267 ntBASIC5.83□□□□□ -1.48
MBD4O95243 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.83□□□□□ -1.48
MBD4O95243 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.83□□□□□ -1.48
MBD4O95243 AC138832.1-201ENST00000522871 556 ntBASIC5.83□□□□□ -1.48
MBD4O95243 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.83□□□□□ -1.48
MBD4O95243 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.83□□□□□ -1.48
MBD4O95243 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.83□□□□□ -1.48
MBD4O95243 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.83□□□□□ -1.48
MBD4O95243 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.83□□□□□ -1.48
MBD4O95243 MIR4700-201ENST00000578311 74 ntBASIC5.83□□□□□ -1.48
MBD4O95243 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MBD4O95243 AC007497.1-201ENST00000610421 561 ntBASIC5.83□□□□□ -1.48
MBD4O95243 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.83□□□□□ -1.48
MBD4O95243 AC090617.9-201ENST00000623751 147 ntBASIC5.83□□□□□ -1.48
MBD4O95243 CR381572.2-201ENST00000624852 397 ntBASIC5.83□□□□□ -1.48
MBD4O95243 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.83□□□□□ -1.48
MBD4O95243 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.83□□□□□ -1.48
MBD4O95243 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
MBD4O95243 MUC2-202ENST00000613187 4845 ntBASIC5.83□□□□□ -1.48
MBD4O95243 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.83□□□□□ -1.48
MBD4O95243 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
MBD4O95243 AC092376.2-201ENST00000622621 4116 ntBASIC5.83□□□□□ -1.48
MBD4O95243 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MBD4O95243 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
MBD4O95243 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.83□□□□□ -1.48
MBD4O95243 SDAD1P1-202ENST00000524156 2051 ntBASIC5.83□□□□□ -1.48
MBD4O95243 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
MBD4O95243 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MBD4O95243 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.82□□□□□ -1.48
MBD4O95243 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MBD4O95243 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
MBD4O95243 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MBD4O95243 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
MBD4O95243 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MBD4O95243 TAF9BP2-201ENST00000400856 499 ntBASIC5.82□□□□□ -1.48
MBD4O95243 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.82□□□□□ -1.48
MBD4O95243 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 RN7SKP100-201ENST00000411258 284 ntBASIC5.82□□□□□ -1.48
MBD4O95243 DPY19L1P2-201ENST00000426647 915 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AL390879.2-203ENST00000426943 1121 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AL160175.1-201ENST00000428124 247 ntBASIC5.82□□□□□ -1.48
MBD4O95243 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 RPL36AP15-201ENST00000444514 266 ntBASIC5.82□□□□□ -1.48
MBD4O95243 OR1H1P-201ENST00000448731 937 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.82□□□□□ -1.48
MBD4O95243 HMGB1P5-202ENST00000451497 985 ntBASIC5.82□□□□□ -1.48
MBD4O95243 MTND2P6-201ENST00000455337 1030 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AC107398.1-201ENST00000486904 505 ntBASIC5.82□□□□□ -1.48
MBD4O95243 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MBD4O95243 RNU6-1004P-201ENST00000516584 111 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 AC105031.1-201ENST00000518550 476 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.82□□□□□ -1.48
MBD4O95243 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.82□□□□□ -1.48
MBD4O95243 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 AC127024.5-201ENST00000580085 462 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 AL512782.1-201ENST00000603093 364 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AC110792.4-201ENST00000609843 298 ntBASIC5.82□□□□□ -1.48
MBD4O95243 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 AC011472.4-201ENST00000615848 491 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AL121890.2-201ENST00000617644 465 ntBASIC5.82□□□□□ -1.48
MBD4O95243 BX005214.3-202ENST00000619809 325 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AP000648.2-201ENST00000624182 404 ntBASIC5.82□□□□□ -1.48
MBD4O95243 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.82□□□□□ -1.48
MBD4O95243 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms