Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FTLP6-201ENST00000355274 422 ntBASIC1.95□□□□□ -2.1
USH2AO75445 RNU1-83P-201ENST00000363426 164 ntBASIC1.95□□□□□ -2.1
USH2AO75445 Y_RNA.466-201ENST00000384294 113 ntBASIC1.95□□□□□ -2.1
USH2AO75445 RNU11-4P-201ENST00000391149 133 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AL159987.2-201ENST00000432754 307 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 FAM172BP-201ENST00000487497 1089 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AC069304.1-201ENST00000491593 704 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 AC099522.1-202ENST00000514718 367 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 AL021997.2-201ENST00000615674 271 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AL713922.2-201ENST00000619384 716 ntBASIC1.95□□□□□ -2.1
USH2AO75445 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
USH2AO75445 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC1.95□□□□□ -2.1
USH2AO75445 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
USH2AO75445 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 DDX18P4-201ENST00000511690 1966 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 AP001273.1-201ENST00000624493 3152 ntBASIC1.95□□□□□ -2.1
USH2AO75445 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
USH2AO75445 RN7SKP185-201ENST00000362813 326 ntBASIC1.95□□□□□ -2.1
USH2AO75445 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 AC115285.1-201ENST00000424879 736 ntBASIC1.95□□□□□ -2.1
USH2AO75445 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 AL831737.1-201ENST00000441288 271 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 AC090142.1-201ENST00000465776 462 ntBASIC1.95□□□□□ -2.1
USH2AO75445 PAICSP4-201ENST00000517543 1253 ntBASIC1.95□□□□□ -2.1
USH2AO75445 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.95□□□□□ -2.1
USH2AO75445 MIR4769-201ENST00000584126 77 ntBASIC1.95□□□□□ -2.1
USH2AO75445 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
USH2AO75445 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 MAPK6PS2-201ENST00000379571 2060 ntBASIC1.95□□□□□ -2.1
USH2AO75445 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 OR6K3-202ENST00000368146 996 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 AP000357.1-201ENST00000409926 1165 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AC092651.1-201ENST00000426110 312 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AC114495.1-201ENST00000441274 436 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 SCARNA14-201ENST00000516903 136 ntBASIC1.95□□□□□ -2.1
USH2AO75445 Y_RNA.719-201ENST00000517156 106 ntBASIC1.95□□□□□ -2.1
USH2AO75445 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 AL606490.9-201ENST00000603331 271 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AL354984.3-201ENST00000604803 325 ntBASIC1.95□□□□□ -2.1
USH2AO75445 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 MALAT1-202ENST00000534336 8708 ntBASIC1.95□□□□□ -2.1
USH2AO75445 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC1.95□□□□□ -2.1
USH2AO75445 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 AC007618.1-201ENST00000366455 732 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AC093719.1-202ENST00000392735 373 ntBASIC1.94□□□□□ -2.1
USH2AO75445 UBE2V1P2-201ENST00000397758 440 ntBASIC1.94□□□□□ -2.1
USH2AO75445 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 AL359265.1-201ENST00000440296 795 ntBASIC1.94□□□□□ -2.1
USH2AO75445 RPS4XP10-201ENST00000465034 731 ntBASIC1.94□□□□□ -2.1
USH2AO75445 RPL17P2-201ENST00000491913 451 ntBASIC1.94□□□□□ -2.1
USH2AO75445 IMPA1P1-201ENST00000510718 842 ntBASIC1.94□□□□□ -2.1
USH2AO75445 Vault.1-201ENST00000516474 102 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC1.94□□□□□ -2.1
USH2AO75445 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 MTND5P1-201ENST00000445440 1375 ntBASIC1.94□□□□□ -2.1
USH2AO75445 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 AC104260.2-201ENST00000623551 3497 ntBASIC1.94□□□□□ -2.1
USH2AO75445 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms