Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.54□□□□□ -1.68
HCN1O60741 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.54□□□□□ -1.68
HCN1O60741 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 AC087783.2-201ENST00000605070 562 ntBASIC4.54□□□□□ -1.68
HCN1O60741 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.54□□□□□ -1.68
HCN1O60741 AC131238.1-201ENST00000617135 328 ntBASIC4.54□□□□□ -1.68
HCN1O60741 SALL4P2-201ENST00000423288 2910 ntBASIC4.54□□□□□ -1.68
HCN1O60741 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 AC093535.2-201ENST00000624769 2326 ntBASIC4.54□□□□□ -1.68
HCN1O60741 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.53□□□□□ -1.68
HCN1O60741 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.53□□□□□ -1.68
HCN1O60741 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HCN1O60741 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HCN1O60741 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HCN1O60741 IL6STP1-201ENST00000346911 1020 ntBASIC4.53□□□□□ -1.68
HCN1O60741 RNU4-23P-201ENST00000362839 140 ntBASIC4.53□□□□□ -1.68
HCN1O60741 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HCN1O60741 EIF4A1P3-201ENST00000411521 244 ntBASIC4.53□□□□□ -1.68
HCN1O60741 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.53□□□□□ -1.68
HCN1O60741 AC073136.2-201ENST00000417282 849 ntBASIC4.53□□□□□ -1.68
HCN1O60741 QRSL1P2-201ENST00000418582 964 ntBASIC4.53□□□□□ -1.68
HCN1O60741 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.53□□□□□ -1.68
HCN1O60741 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.53□□□□□ -1.68
HCN1O60741 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 ARAFP1-201ENST00000422172 605 ntBASIC4.53□□□□□ -1.68
HCN1O60741 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.53□□□□□ -1.68
HCN1O60741 AL360081.1-201ENST00000428299 555 ntBASIC4.53□□□□□ -1.68
HCN1O60741 BX323845.1-201ENST00000432417 179 ntBASIC4.53□□□□□ -1.68
HCN1O60741 AC092162.1-201ENST00000432828 434 ntBASIC4.53□□□□□ -1.68
HCN1O60741 RPL7P11-201ENST00000437586 658 ntBASIC4.53□□□□□ -1.68
HCN1O60741 ARL4AP3-201ENST00000441452 574 ntBASIC4.53□□□□□ -1.68
HCN1O60741 C1DP3-201ENST00000455013 423 ntBASIC4.53□□□□□ -1.68
HCN1O60741 RPS29P22-201ENST00000472363 168 ntBASIC4.53□□□□□ -1.68
HCN1O60741 BTF3P13-201ENST00000513224 490 ntBASIC4.53□□□□□ -1.68
HCN1O60741 AC012339.2-201ENST00000523996 453 ntBASIC4.53□□□□□ -1.68
HCN1O60741 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.53□□□□□ -1.68
HCN1O60741 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
HCN1O60741 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.53□□□□□ -1.68
HCN1O60741 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.53□□□□□ -1.68
HCN1O60741 CYCSP40-201ENST00000575927 294 ntBASIC4.53□□□□□ -1.68
HCN1O60741 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.53□□□□□ -1.68
HCN1O60741 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.53□□□□□ -1.68
HCN1O60741 AC233280.2-201ENST00000603917 1070 ntBASIC4.53□□□□□ -1.68
HCN1O60741 AC087283.1-201ENST00000604029 1074 ntBASIC4.53□□□□□ -1.68
HCN1O60741 AC239803.2-201ENST00000610161 430 ntBASIC4.53□□□□□ -1.68
HCN1O60741 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.53□□□□□ -1.68
HCN1O60741 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.53□□□□□ -1.68
HCN1O60741 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.53□□□□□ -1.68
HCN1O60741 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 CASC19-204ENST00000641001 2055 ntBASIC4.53□□□□□ -1.68
HCN1O60741 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
HCN1O60741 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HCN1O60741 OR51C1P-202ENST00000641159 1444 ntBASIC4.53□□□□□ -1.68
HCN1O60741 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
HCN1O60741 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.53□□□□□ -1.69
HCN1O60741 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 DHX9P1-201ENST00000436565 3076 ntBASIC4.52□□□□□ -1.69
HCN1O60741 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.52□□□□□ -1.69
HCN1O60741 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.52□□□□□ -1.69
HCN1O60741 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HCN1O60741 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HCN1O60741 RNU6-386P-201ENST00000362650 107 ntBASIC4.52□□□□□ -1.69
HCN1O60741 AC019155.1-201ENST00000382242 574 ntBASIC4.52□□□□□ -1.69
HCN1O60741 SNORA70.10-201ENST00000384515 134 ntBASIC4.52□□□□□ -1.69
HCN1O60741 AC093719.1-202ENST00000392735 373 ntBASIC4.52□□□□□ -1.69
HCN1O60741 ATP5HP3-201ENST00000396994 486 ntBASIC4.52□□□□□ -1.69
HCN1O60741 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.52□□□□□ -1.69
HCN1O60741 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.52□□□□□ -1.69
HCN1O60741 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.52□□□□□ -1.69
HCN1O60741 CYCSP10-201ENST00000417973 294 ntBASIC4.52□□□□□ -1.69
HCN1O60741 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.52□□□□□ -1.69
HCN1O60741 E2F6P2-201ENST00000420708 748 ntBASIC4.52□□□□□ -1.69
HCN1O60741 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.52□□□□□ -1.69
HCN1O60741 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.52□□□□□ -1.69
HCN1O60741 AC073052.1-201ENST00000440417 714 ntBASIC4.52□□□□□ -1.69
HCN1O60741 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.52□□□□□ -1.69
HCN1O60741 AC073587.1-201ENST00000447093 876 ntBASIC4.52□□□□□ -1.69
HCN1O60741 TCEA1P1-201ENST00000449716 880 ntBASIC4.52□□□□□ -1.69
HCN1O60741 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.52□□□□□ -1.69
HCN1O60741 RNU6-775P-201ENST00000459318 96 ntBASIC4.52□□□□□ -1.69
HCN1O60741 RN7SL517P-201ENST00000462240 305 ntBASIC4.52□□□□□ -1.69
HCN1O60741 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.52□□□□□ -1.69
HCN1O60741 AC037198.2-201ENST00000478845 733 ntBASIC4.52□□□□□ -1.69
HCN1O60741 OR52A4P-203ENST00000498233 1014 ntBASIC4.52□□□□□ -1.69
HCN1O60741 AC105233.1-201ENST00000498840 781 ntBASIC4.52□□□□□ -1.69
HCN1O60741 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms