Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SSSCA1O60232 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.59□□□□□ -1.83
SSSCA1O60232 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SSSCA1O60232 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SSSCA1O60232 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.59□□□□□ -1.84
SSSCA1O60232 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SSSCA1O60232 AC006971.1-201ENST00000407916 4486 ntBASIC3.59□□□□□ -1.84
SSSCA1O60232 LINC00622-201ENST00000562811 1570 ntBASIC3.59□□□□□ -1.84
SSSCA1O60232 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.84
SSSCA1O60232 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.58□□□□□ -1.84
SSSCA1O60232 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SSSCA1O60232 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AC097504.1-201ENST00000515103 2415 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AL512430.2-201ENST00000406786 339 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.58□□□□□ -1.84
SSSCA1O60232 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.58□□□□□ -1.84
SSSCA1O60232 ELOCP8-201ENST00000439309 332 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 ELOCP15-201ENST00000442090 332 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 OR1H1P-201ENST00000448731 937 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 FGF7P3-201ENST00000454645 303 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 RPS6P4-201ENST00000494693 758 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AC017037.1-201ENST00000508460 471 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.58□□□□□ -1.84
SSSCA1O60232 NPM1P6-201ENST00000521088 871 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 AC013701.1-201ENST00000522657 465 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AC124068.1-201ENST00000563131 678 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 AC006116.3-201ENST00000592968 361 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.58□□□□□ -1.84
SSSCA1O60232 MIR432-201ENST00000606207 94 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 AC012603.1-201ENST00000606424 528 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 MIR1910-201ENST00000636955 80 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 LINC01739-205ENST00000641890 573 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 CPHL1P-201ENST00000461341 3407 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.58□□□□□ -1.84
SSSCA1O60232 AL606537.1-201ENST00000607258 2011 ntBASIC3.58□□□□□ -1.84
SSSCA1O60232 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.58□□□□□ -1.84
SSSCA1O60232 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.58□□□□□ -1.84
SSSCA1O60232 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSSCA1O60232 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SSSCA1O60232 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSSCA1O60232 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSSCA1O60232 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SSSCA1O60232 DDX18P3-201ENST00000404856 2007 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.57□□□□□ -1.84
SSSCA1O60232 ATG4AP1-201ENST00000416893 538 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC092647.1-201ENST00000420654 287 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 IPMKP1-201ENST00000425988 855 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.57□□□□□ -1.84
SSSCA1O60232 CYCSP11-201ENST00000436426 315 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 PABPC1P6-201ENST00000445594 1829 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.57□□□□□ -1.84
SSSCA1O60232 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.57□□□□□ -1.84
SSSCA1O60232 ZNF137P-201ENST00000456718 1920 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 SEPT14P1-201ENST00000458703 648 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 RPS27AP17-201ENST00000463344 455 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.57□□□□□ -1.84
SSSCA1O60232 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSSCA1O60232 AC011411.1-201ENST00000509592 876 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC007016.1-201ENST00000512110 244 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.57□□□□□ -1.84
SSSCA1O60232 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.57□□□□□ -1.84
SSSCA1O60232 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.57□□□□□ -1.84
SSSCA1O60232 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.57□□□□□ -1.84
SSSCA1O60232 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.57□□□□□ -1.84
SSSCA1O60232 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.57□□□□□ -1.84
SSSCA1O60232 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.57□□□□□ -1.84
SSSCA1O60232 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.57□□□□□ -1.84
SSSCA1O60232 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SSSCA1O60232 AC009163.6-201ENST00000612367 342 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC009704.2-201ENST00000618739 483 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC233309.1-201ENST00000619522 751 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC103858.2-201ENST00000621471 543 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC019278.1-201ENST00000623516 479 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AP003499.2-201ENST00000624100 483 ntBASIC3.57□□□□□ -1.84
SSSCA1O60232 AC067931.1-201ENST00000624190 671 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms