Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL136131.1-201ENST00000406079 803 ntBASIC5.4□□□□□ -1.54
PROM1O43490 RPS3AP2-201ENST00000407190 754 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.4□□□□□ -1.54
PROM1O43490 AC011233.1-201ENST00000422812 283 ntBASIC5.4□□□□□ -1.54
PROM1O43490 RPF2P1-201ENST00000424137 906 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC234781.2-201ENST00000426370 994 ntBASIC5.4□□□□□ -1.54
PROM1O43490 RPL23AP4-201ENST00000427757 463 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AL022331.1-201ENST00000429025 477 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AL136231.1-201ENST00000429407 730 ntBASIC5.4□□□□□ -1.54
PROM1O43490 HMGB3P24-201ENST00000433260 622 ntBASIC5.4□□□□□ -1.54
PROM1O43490 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.4□□□□□ -1.54
PROM1O43490 MTCO2P3-201ENST00000442543 421 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC016772.1-201ENST00000444170 1261 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.4□□□□□ -1.54
PROM1O43490 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.4□□□□□ -1.54
PROM1O43490 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.4□□□□□ -1.54
PROM1O43490 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.4□□□□□ -1.54
PROM1O43490 AL133477.1-201ENST00000457472 514 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC026348.1-201ENST00000462549 1053 ntBASIC5.4□□□□□ -1.54
PROM1O43490 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.4□□□□□ -1.54
PROM1O43490 RPS26P39-201ENST00000469206 341 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC025459.1-201ENST00000504072 156 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC111000.2-201ENST00000507775 550 ntBASIC5.4□□□□□ -1.54
PROM1O43490 GLUD1P3-202ENST00000508551 200 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC008565.1-201ENST00000509046 885 ntBASIC5.4□□□□□ -1.54
PROM1O43490 SNORA70.20-201ENST00000516848 126 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.4□□□□□ -1.54
PROM1O43490 AC020937.1-201ENST00000519677 1013 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.4□□□□□ -1.54
PROM1O43490 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.4□□□□□ -1.54
PROM1O43490 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.4□□□□□ -1.54
PROM1O43490 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PROM1O43490 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.4□□□□□ -1.54
PROM1O43490 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.4□□□□□ -1.54
PROM1O43490 AGGF1P7-201ENST00000562369 913 ntBASIC5.4□□□□□ -1.54
PROM1O43490 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.4□□□□□ -1.54
PROM1O43490 SNORD95-201ENST00000579879 68 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.4□□□□□ -1.54
PROM1O43490 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.4□□□□□ -1.54
PROM1O43490 MIR3176-201ENST00000582210 90 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AP001269.3-201ENST00000588718 329 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC068020.1-201ENST00000594215 661 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC063977.5-201ENST00000601044 974 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC130352.1-201ENST00000602979 661 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC105129.3-201ENST00000605455 485 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AL021707.7-201ENST00000607991 416 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC090607.5-201ENST00000615692 224 ntBASIC5.4□□□□□ -1.54
PROM1O43490 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.4□□□□□ -1.54
PROM1O43490 RN7SL544P-201ENST00000617232 284 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AL121890.3-201ENST00000618494 516 ntBASIC5.4□□□□□ -1.54
PROM1O43490 RN7SL763P-201ENST00000620922 284 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC073530.2-201ENST00000623987 261 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC098679.5-201ENST00000624394 571 ntBASIC5.4□□□□□ -1.54
PROM1O43490 OR1S1-201ENST00000624470 978 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC010608.2-201ENST00000624830 470 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AC005618.4-201ENST00000625053 554 ntBASIC5.4□□□□□ -1.54
PROM1O43490 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PROM1O43490 MT-RNR2-201ENST00000387347 1559 ntBASIC5.4□□□□□ -1.55
PROM1O43490 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
PROM1O43490 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PROM1O43490 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PROM1O43490 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PROM1O43490 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
PROM1O43490 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PROM1O43490 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PROM1O43490 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PROM1O43490 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 SAMMSON-213ENST00000641336 1521 ntBASIC5.39□□□□□ -1.55
PROM1O43490 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PROM1O43490 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PROM1O43490 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 SNORD113-6-201ENST00000363345 75 ntBASIC5.39□□□□□ -1.55
PROM1O43490 Y_RNA.201-201ENST00000364052 96 ntBASIC5.39□□□□□ -1.55
PROM1O43490 RN7SKP292-201ENST00000365522 317 ntBASIC5.39□□□□□ -1.55
PROM1O43490 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.39□□□□□ -1.55
PROM1O43490 SNORD65C-201ENST00000390962 71 ntBASIC5.39□□□□□ -1.55
PROM1O43490 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 TIMM9P2-201ENST00000419324 266 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.39□□□□□ -1.55
PROM1O43490 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.39□□□□□ -1.55
PROM1O43490 RAC1P8-201ENST00000427086 527 ntBASIC5.39□□□□□ -1.55
PROM1O43490 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 AL121776.1-201ENST00000429337 372 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.39□□□□□ -1.55
PROM1O43490 AC138761.5-201ENST00000433967 325 ntBASIC5.39□□□□□ -1.55
PROM1O43490 MTND2P40-201ENST00000436718 841 ntBASIC5.39□□□□□ -1.55
PROM1O43490 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 AL592437.1-201ENST00000443781 492 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 MTCYBP42-201ENST00000444653 1130 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 RPL36AP39-201ENST00000445859 318 ntBASIC5.39□□□□□ -1.55
PROM1O43490 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms