Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA3O43365 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA3O43365 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HOXA3O43365 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA3O43365 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA3O43365 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA3O43365 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA3O43365 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA3O43365 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA3O43365 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXA3O43365 AL590763.1-201ENST00000398297 1545 ntBASIC5.12□□□□□ -1.59
HOXA3O43365 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA3O43365 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA3O43365 ZNF402P-201ENST00000404435 3100 ntBASIC5.12□□□□□ -1.59
HOXA3O43365 TTC41P-205ENST00000551270 3963 ntBASIC5.12□□□□□ -1.59
HOXA3O43365 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA3O43365 UGT2B27P-201ENST00000505092 1620 ntBASIC5.12□□□□□ -1.59
HOXA3O43365 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
HOXA3O43365 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA3O43365 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 CDC27P2-201ENST00000425026 1922 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 AC074141.1-201ENST00000588129 2995 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA3O43365 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXA3O43365 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 LCN1P2-201ENST00000372030 223 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 RNU6-317P-201ENST00000384031 107 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXA3O43365 RPL23AP29-201ENST00000397284 453 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 MTCYBP36-201ENST00000404146 440 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AL139098.1-201ENST00000407291 389 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 RPL21P32-201ENST00000419877 477 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC062016.2-201ENST00000420950 676 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA3O43365 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC022022.1-201ENST00000430304 178 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 RPS27AP15-201ENST00000447672 466 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 NANOGNBP1-201ENST00000448444 480 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC018638.3-201ENST00000461273 132 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 RN7SL221P-201ENST00000466190 281 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC004924.1-201ENST00000480160 781 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 RN7SL714P-201ENST00000487050 298 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC106800.2-201ENST00000514009 1103 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXA3O43365 RN7SKP244-201ENST00000516513 307 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 RN7SKP35-201ENST00000517210 151 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXA3O43365 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC087276.1-201ENST00000529659 480 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA3O43365 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 RPS3AP4-201ENST00000555161 764 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 CYCSP38-201ENST00000559840 322 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA3O43365 TPRKBP2-201ENST00000565969 475 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA3O43365 KPNA2P3-201ENST00000584190 848 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA3O43365 AP000403.1-201ENST00000603349 851 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC005084.1-201ENST00000605160 304 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AL096712.1-201ENST00000614561 159 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 FAM27E2-201ENST00000619668 403 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AC018816.2-201ENST00000621460 353 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 OR52B5P-202ENST00000641118 1110 ntBASIC5.11□□□□□ -1.59
HOXA3O43365 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA3O43365 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.11□□□□□ -1.59
HOXA3O43365 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms