Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC025164.1-201ENST00000496249 478 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN3O15551 OR5M2P-201ENST00000529003 936 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.13□□□□□ -1.59
CLDN3O15551 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN3O15551 RN7SL690P-201ENST00000582087 240 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN3O15551 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.13□□□□□ -1.59
CLDN3O15551 AC119501.1-201ENST00000603646 475 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AP001642.1-201ENST00000624727 2117 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.13□□□□□ -1.59
CLDN3O15551 AC126323.6-202ENST00000568092 3511 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.13□□□□□ -1.59
CLDN3O15551 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CLDN3O15551 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN3O15551 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 RNU4-44P-201ENST00000363050 141 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 RNU6-891P-201ENST00000384280 111 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 MIR192-201ENST00000384915 110 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AC233289.1-201ENST00000403700 508 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN3O15551 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN3O15551 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN3O15551 RPL7P57-201ENST00000423238 740 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AC093084.1-201ENST00000424233 687 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 FABP7P2-201ENST00000429946 379 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN3O15551 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN3O15551 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN3O15551 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.12□□□□□ -1.59
CLDN3O15551 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN3O15551 RFPL4AP5-201ENST00000514977 504 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AC138938.1-201ENST00000515431 782 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN3O15551 CD24P2-201ENST00000565486 219 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AC068790.7-201ENST00000602347 528 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AL121890.2-201ENST00000617644 465 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN3O15551 AC022106.2-201ENST00000620114 757 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AC015804.1-201ENST00000622935 435 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN3O15551 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 VPS35P1-201ENST00000563400 1518 ntBASIC5.12□□□□□ -1.59
CLDN3O15551 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN3O15551 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN3O15551 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN3O15551 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN3O15551 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN3O15551 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN3O15551 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN3O15551 Z98745.1-201ENST00000402553 494 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 AL359643.1-201ENST00000404109 423 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN3O15551 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN3O15551 AC022022.1-201ENST00000430304 178 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN3O15551 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN3O15551 AL138878.2-201ENST00000440581 1241 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN3O15551 AL031584.1-201ENST00000447169 754 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 AC108463.1-201ENST00000450258 347 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN3O15551 AC069277.2-201ENST00000454211 432 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN3O15551 AC008897.1-201ENST00000494006 347 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 SEC11B-201ENST00000518383 499 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN3O15551 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN3O15551 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN3O15551 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN3O15551 AC027281.1-201ENST00000574178 758 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 SNX6P1-201ENST00000601728 1224 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 AC073091.2-201ENST00000603205 907 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 MIR6820-201ENST00000611508 62 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 RMST_5.1-201ENST00000618704 126 ntBASIC5.11□□□□□ -1.59
CLDN3O15551 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN3O15551 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN3O15551 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN3O15551 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN3O15551 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLDN3O15551 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLDN3O15551 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN3O15551 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms