Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RN7SL817P-201ENST00000480777 288 ntBASIC6.7□□□□□ -1.34
SOX1O00570 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.7□□□□□ -1.34
SOX1O00570 MTCYBP17-201ENST00000503579 789 ntBASIC6.7□□□□□ -1.34
SOX1O00570 MTND5P5-201ENST00000503764 376 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX1O00570 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.7□□□□□ -1.34
SOX1O00570 SCARNA15.1-201ENST00000516384 125 ntBASIC6.7□□□□□ -1.34
SOX1O00570 RNU6-358P-201ENST00000516564 75 ntBASIC6.7□□□□□ -1.34
SOX1O00570 CDC42P3-201ENST00000518493 633 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.7□□□□□ -1.34
SOX1O00570 AC106785.4-201ENST00000569492 412 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AP005119.2-201ENST00000579735 1105 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX1O00570 AC125494.2-201ENST00000602431 657 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AL139089.1-201ENST00000620372 975 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AC009033.1-201ENST00000624279 431 ntBASIC6.7□□□□□ -1.34
SOX1O00570 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SOX1O00570 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.7□□□□□ -1.34
SOX1O00570 MAPK10-383ENST00000642032 3390 ntBASIC6.7□□□□□ -1.34
SOX1O00570 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.7□□□□□ -1.34
SOX1O00570 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX1O00570 AC015871.3-201ENST00000618835 2261 ntBASIC6.7□□□□□ -1.34
SOX1O00570 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 AC093297.3-201ENST00000607056 2517 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AL023806.3-201ENST00000638502 2704 ntBASIC6.7□□□□□ -1.34
SOX1O00570 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SOX1O00570 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SOX1O00570 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX1O00570 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX1O00570 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
SOX1O00570 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SOX1O00570 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX1O00570 Z93929.1-201ENST00000418200 1475 ntBASIC6.69□□□□□ -1.34
SOX1O00570 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 RNA5SP394-201ENST00000364216 119 ntBASIC6.69□□□□□ -1.34
SOX1O00570 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 RNU6-452P-201ENST00000384406 107 ntBASIC6.69□□□□□ -1.34
SOX1O00570 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SOX1O00570 RNA5SP105-201ENST00000391123 113 ntBASIC6.69□□□□□ -1.34
SOX1O00570 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.69□□□□□ -1.34
SOX1O00570 AIMP1P1-201ENST00000418670 937 ntBASIC6.69□□□□□ -1.34
SOX1O00570 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 AC093084.1-201ENST00000424233 687 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX1O00570 AC127526.2-201ENST00000426436 775 ntBASIC6.69□□□□□ -1.34
SOX1O00570 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.69□□□□□ -1.34
SOX1O00570 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX1O00570 AC073614.1-201ENST00000438690 650 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX1O00570 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX1O00570 ARPC3P2-201ENST00000457786 533 ntBASIC6.69□□□□□ -1.34
SOX1O00570 GLRXP3-201ENST00000470810 321 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AL355032.1-201ENST00000472981 438 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AC006463.2-201ENST00000473326 348 ntBASIC6.69□□□□□ -1.34
SOX1O00570 RPL7AP6-201ENST00000477943 801 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AP000797.1-201ENST00000478870 387 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 AC090958.1-201ENST00000511122 351 ntBASIC6.69□□□□□ -1.34
SOX1O00570 PTTG3P-201ENST00000521862 606 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX1O00570 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX1O00570 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SOX1O00570 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 AC013283.1-201ENST00000557282 492 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX1O00570 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX1O00570 AC133644.2-201ENST00000608142 540 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AC107214.2-201ENST00000608204 634 ntBASIC6.69□□□□□ -1.34
SOX1O00570 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 AC055764.2-201ENST00000610089 670 ntBASIC6.69□□□□□ -1.34
SOX1O00570 PART1_1.1-201ENST00000611761 217 ntBASIC6.69□□□□□ -1.34
SOX1O00570 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX1O00570 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.69□□□□□ -1.34
SOX1O00570 U6.107-201ENST00000637108 79 ntBASIC6.69□□□□□ -1.34
SOX1O00570 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 AL137058.3-201ENST00000624531 3099 ntBASIC6.69□□□□□ -1.34
SOX1O00570 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms