Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCAO00442 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RTCAO00442 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCAO00442 HMGB2P1-201ENST00000591146 634 ntBASIC4.87□□□□□ -1.63
RTCAO00442 AC093765.1-201ENST00000603758 881 ntBASIC4.87□□□□□ -1.63
RTCAO00442 AC010857.1-201ENST00000606398 594 ntBASIC4.87□□□□□ -1.63
RTCAO00442 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 AC024023.1-201ENST00000624530 922 ntBASIC4.87□□□□□ -1.63
RTCAO00442 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCAO00442 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 AL353743.4-201ENST00000422653 1547 ntBASIC4.87□□□□□ -1.63
RTCAO00442 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCAO00442 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.86□□□□□ -1.63
RTCAO00442 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 AC073136.1-201ENST00000449426 2884 ntBASIC4.86□□□□□ -1.63
RTCAO00442 RPL23P2-201ENST00000320371 421 ntBASIC4.86□□□□□ -1.63
RTCAO00442 OR9K1P-201ENST00000326513 941 ntBASIC4.86□□□□□ -1.63
RTCAO00442 U3.7-201ENST00000363668 216 ntBASIC4.86□□□□□ -1.63
RTCAO00442 RNU6-1279P-201ENST00000383917 103 ntBASIC4.86□□□□□ -1.63
RTCAO00442 SNORA2.3-201ENST00000383920 135 ntBASIC4.86□□□□□ -1.63
RTCAO00442 MIR223-201ENST00000385204 110 ntBASIC4.86□□□□□ -1.63
RTCAO00442 Z86062.1-201ENST00000406773 777 ntBASIC4.86□□□□□ -1.63
RTCAO00442 RN7SKP114-201ENST00000410327 279 ntBASIC4.86□□□□□ -1.63
RTCAO00442 PCNPP4-201ENST00000414817 517 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCAO00442 AL139148.1-201ENST00000427122 680 ntBASIC4.86□□□□□ -1.63
RTCAO00442 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCAO00442 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.86□□□□□ -1.63
RTCAO00442 AC091180.1-201ENST00000462104 372 ntBASIC4.86□□□□□ -1.63
RTCAO00442 RN7SL443P-201ENST00000464331 290 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AC005412.2-201ENST00000492004 341 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.86□□□□□ -1.63
RTCAO00442 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.86□□□□□ -1.63
RTCAO00442 COL6A4P2-205ENST00000509855 506 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCAO00442 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCAO00442 DEFB109D-201ENST00000529497 240 ntBASIC4.86□□□□□ -1.63
RTCAO00442 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.86□□□□□ -1.63
RTCAO00442 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCAO00442 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 AL161713.1-201ENST00000555538 145 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCAO00442 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 AL390726.5-202ENST00000564800 256 ntBASIC4.86□□□□□ -1.63
RTCAO00442 RN7SL753P-201ENST00000581238 290 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 OR6R2P-201ENST00000609216 300 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AP004607.9-201ENST00000618202 316 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AC099494.2-201ENST00000623371 978 ntBASIC4.86□□□□□ -1.63
RTCAO00442 AL356094.1-201ENST00000624663 1212 ntBASIC4.86□□□□□ -1.63
RTCAO00442 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 AC006453.5-201ENST00000636451 619 ntBASIC4.86□□□□□ -1.63
RTCAO00442 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RTCAO00442 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 AC090229.1-201ENST00000590983 1609 ntBASIC4.86□□□□□ -1.63
RTCAO00442 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCAO00442 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RTCAO00442 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RTCAO00442 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.85□□□□□ -1.63
RTCAO00442 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RTCAO00442 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RTCAO00442 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.85□□□□□ -1.63
RTCAO00442 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.85□□□□□ -1.63
RTCAO00442 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCAO00442 RNU4-39P-201ENST00000362455 127 ntBASIC4.85□□□□□ -1.63
RTCAO00442 OR1F12-201ENST00000402365 945 ntBASIC4.85□□□□□ -1.63
RTCAO00442 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.85□□□□□ -1.63
RTCAO00442 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.85□□□□□ -1.63
RTCAO00442 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.85□□□□□ -1.63
RTCAO00442 RPL7AP61-201ENST00000443410 636 ntBASIC4.85□□□□□ -1.63
RTCAO00442 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.85□□□□□ -1.63
RTCAO00442 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.85□□□□□ -1.63
RTCAO00442 HMGB1P46-201ENST00000520062 610 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms