Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC188H7C350 RNU1-43P-201ENST00000365052 165 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 ARL4AP5-201ENST00000404372 599 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC188H7C350 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AL161636.2-201ENST00000445179 927 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC188H7C350 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC188H7C350 HMGB1P19-201ENST00000517578 577 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC188H7C350 FKBP1BP1-201ENST00000553366 325 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 AL049779.2-201ENST00000553847 315 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 AL390334.1-201ENST00000556395 450 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AL589674.2-201ENST00000604304 337 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 AC091979.2-201ENST00000607514 214 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 AC010424.2-201ENST00000607594 443 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 AP000894.4-201ENST00000610185 483 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 MIR6837-201ENST00000620884 64 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC188H7C350 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC188H7C350 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC188H7C350 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCDC188H7C350 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC188H7C350 AP001002.1-201ENST00000625148 1513 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 AL672167.1-203ENST00000641299 2975 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC188H7C350 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC188H7C350 NEAT1-202ENST00000501122 22743 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 OR56B2P-201ENST00000317102 954 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 CHMP1B2P-201ENST00000399581 597 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 DUTP5-201ENST00000406790 469 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 RNA5SP146-201ENST00000410743 123 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 RNU2-72P-201ENST00000411175 163 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 AC105402.1-201ENST00000413336 545 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 TBCAP2-201ENST00000416175 326 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 OR2AM1P-201ENST00000422137 422 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 RPL7P57-201ENST00000423238 740 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC188H7C350 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC188H7C350 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC188H7C350 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC188H7C350 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC188H7C350 RPL5P22-201ENST00000480199 884 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
CCDC188H7C350 RN7SL244P-201ENST00000493405 297 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 PGAM1P13-201ENST00000507497 754 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC188H7C350 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC188H7C350 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC188H7C350 CBX3P2-202ENST00000583365 535 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC188H7C350 AC124856.1-201ENST00000600819 896 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 SUMO2P14-201ENST00000604488 293 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 AC090525.3-201ENST00000605601 189 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC188H7C350 AC011815.3-201ENST00000624194 473 ntBASIC5.01□□□□□ -1.61
CCDC188H7C350 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC188H7C350 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC188H7C350 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC188H7C350 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC188H7C350 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC188H7C350 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC188H7C350 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5□□□□□ -1.61
CCDC188H7C350 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 Z97832.1-201ENST00000402490 328 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5□□□□□ -1.61
CCDC188H7C350 AC016769.2-201ENST00000414815 475 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5□□□□□ -1.61
CCDC188H7C350 AC048351.1-201ENST00000420064 602 ntBASIC5□□□□□ -1.61
CCDC188H7C350 Z74021.1-201ENST00000423610 407 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC104843.2-201ENST00000427666 297 ntBASIC5□□□□□ -1.61
CCDC188H7C350 ARL4AP4-201ENST00000434170 518 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5□□□□□ -1.61
CCDC188H7C350 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms