Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SSR1P2-201ENST00000415208 787 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 QRSL1P2-201ENST00000418582 964 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 OR2AH1P-201ENST00000425717 928 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 FO393419.3-201ENST00000428741 282 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC245047.2-201ENST00000441060 530 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 RPL34P26-201ENST00000445636 354 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 SEPT14P24-201ENST00000447236 180 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 HMGB1P4-201ENST00000455362 567 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 RPL6P9-201ENST00000466502 859 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 RPS27AP16-201ENST00000492222 470 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC108693.1-201ENST00000496068 432 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC139103.1-201ENST00000534696 1030 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC011611.5-201ENST00000552477 578 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC093424.1-201ENST00000604999 338 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC004908.3-201ENST00000610248 625 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 FRG1HP-204ENST00000617940 757 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC026124.2-201ENST00000621847 656 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC119674.1-212ENST00000641155 993 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 CR788268.1-201ENST00000603931 1809 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 METTL21EP-201ENST00000298105 713 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC233289.1-201ENST00000403700 508 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 DUTP5-201ENST00000406790 469 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 MTCO3P4-201ENST00000419236 787 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC079807.1-201ENST00000429993 481 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 OR10R1P-201ENST00000441524 1141 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 HSFY3P-201ENST00000444242 1191 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC004980.3-201ENST00000447046 365 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC093166.2-201ENST00000455969 1017 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 SETP20-201ENST00000457046 852 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC021146.5-201ENST00000503544 545 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-1028P-201ENST00000517164 93 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 OR8I1P-201ENST00000529291 931 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC024940.3-201ENST00000538551 316 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 OR11J2P-201ENST00000555298 907 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 Z82195.1-201ENST00000604558 398 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AL365400.2-201ENST00000605604 902 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms