Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 AC009643.2-201ENST00000603543 1448 ntBASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP2Q9UDT6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 Z98755.1-201ENST00000407015 1384 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 TMX2P1-201ENST00000436507 708 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC016831.4-201ENST00000438302 307 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC096741.1-201ENST00000472250 846 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 RN7SKP34-201ENST00000516142 244 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 RNU2-30P-201ENST00000516209 141 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 RNU4-18P-201ENST00000516751 149 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 VN1R81P-201ENST00000602085 372 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC239803.2-201ENST00000610161 430 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AL158062.1-201ENST00000619632 745 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 SMG1P6-201ENST00000532337 2930 ntBASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CLIP2Q9UDT6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AL442639.1-201ENST00000625030 1899 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 MAPK10-349ENST00000641767 3661 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AL133268.1-201ENST00000405676 1401 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 RNU1-82P-201ENST00000390851 165 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 GLULP6-201ENST00000399502 913 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 FAR2P2-201ENST00000413041 594 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC106901.1-201ENST00000425086 698 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 FAR2P4-202ENST00000425399 584 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AL451139.1-201ENST00000434718 346 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 CYCSP11-201ENST00000436426 315 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 RHEBP2-201ENST00000450289 600 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 CEACAMP6-201ENST00000452007 574 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC108751.2-201ENST00000469993 231 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AGGF1P3-201ENST00000493675 1213 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AC107068.1-201ENST00000563286 4218 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 AP000542.2-201ENST00000623199 6179 ntBASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP2Q9UDT6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 RPS4XP9-201ENST00000405151 780 ntBASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 CKS1BP6-201ENST00000424932 240 ntBASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 UBE2V2P1-201ENST00000434717 398 ntBASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms