Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU6-603P-201ENST00000411403 107 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC010385.1-201ENST00000412374 256 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 MTND2P11-201ENST00000423638 648 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 RPS26P47-201ENST00000427219 348 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 PSMD10P3-201ENST00000437000 448 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 MED6P1-201ENST00000439659 713 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AL353093.1-201ENST00000441292 436 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC000111.2-201ENST00000448200 210 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 EIF4A1P11-201ENST00000451239 222 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC110749.1-201ENST00000462007 357 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 RN7SKP66-201ENST00000516681 231 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC079880.2-201ENST00000603790 1213 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC010200.2-201ENST00000605098 235 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC009163.6-201ENST00000612367 342 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC016957.2-201ENST00000616998 848 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 AC005005.4-201ENST00000623789 16698 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.52
BLOC1S4Q9NUP1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 RN7SKP104-201ENST00000362605 328 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 RNA5SP305-201ENST00000362665 119 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 RNU6-252P-201ENST00000363232 107 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL357515.1-201ENST00000402967 542 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC019070.1-201ENST00000415008 1024 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 RPL23AP27-201ENST00000415161 451 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 LINC01347-201ENST00000417964 355 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 MTCO3P4-201ENST00000419236 787 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL590609.2-201ENST00000421430 368 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 RPL12P18-201ENST00000437175 325 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL031663.1-201ENST00000437445 219 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 RPL7P11-201ENST00000437586 658 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC092647.3-201ENST00000443044 633 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 RPL7L1P1-201ENST00000448259 785 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC018638.3-201ENST00000461273 132 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AP002812.4-201ENST00000532139 286 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC055764.2-201ENST00000610089 670 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AL049794.2-201ENST00000616301 365 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC018445.2-201ENST00000622987 260 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AC015908.5-201ENST00000623289 343 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AP002799.1-201ENST00000623552 423 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 AP006248.3-201ENST00000623580 594 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 HSPA8P18-201ENST00000439846 1928 ntBASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BLOC1S4Q9NUP1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms