Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AADACP1-206ENST00000561502 1193 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 MIR3611-201ENST00000584484 83 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC063977.5-201ENST00000601044 974 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 OR2BH1P-201ENST00000608850 864 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL049539.1-201ENST00000611964 459 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC087241.4-201ENST00000612441 480 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC105227.2-201ENST00000615075 605 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 U6.42-201ENST00000618440 107 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RNU6-368P-201ENST00000620928 107 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RNU6-538P-201ENST00000622329 107 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC091932.2-201ENST00000623014 291 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL356121.2-201ENST00000624715 780 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC005609.4-201ENST00000625071 447 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 ZNF663P-202ENST00000641770 1131 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 RNU1-59P-201ENST00000364829 162 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 RNA5SP131-201ENST00000365452 119 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 Y_RNA.465-201ENST00000384293 102 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 Y_RNA.517-201ENST00000384551 106 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AL645733.1-201ENST00000402250 217 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 METTL15P3-201ENST00000415522 1221 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 NPM1P11-201ENST00000417106 855 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 ETF1P3-201ENST00000430422 1160 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 NEK4P1-201ENST00000433383 879 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 MTCYBP34-201ENST00000439552 670 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 MTCO1P19-201ENST00000443487 500 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 MTCYBP3-201ENST00000445588 1137 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 HMGB1P48-201ENST00000446155 598 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AL161722.1-201ENST00000446972 1032 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 RPL32P33-201ENST00000487023 394 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 PGAM1P13-201ENST00000507497 754 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC008885.2-201ENST00000509506 930 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AL049779.2-201ENST00000553847 315 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 MIR4433B-201ENST00000581329 102 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AL135786.2-201ENST00000608422 615 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC069234.5-201ENST00000611056 416 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 U1.25-201ENST00000614085 162 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 U1.31-201ENST00000620022 160 ntBASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDLIM7Q9NR12 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms