Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 COX6CP18-201ENST00000448769 222 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC022431.1-201ENST00000450941 438 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 NDUFA12P1-201ENST00000455914 406 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 RPS6P4-201ENST00000494693 758 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 MTND4P2-201ENST00000507767 1203 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 BLZF2P-201ENST00000553776 1130 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC012435.1-202ENST00000568772 240 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AL451049.1-201ENST00000608672 497 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC005962.2-201ENST00000611427 652 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AC005332.6-201ENST00000613178 446 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 MIR1910-201ENST00000636955 80 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 SAMMSON-209ENST00000641222 1100 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 MIR193BHG-214ENST00000641765 509 ntBASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM39Q9HCM9 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
TRIM39Q9HCM9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
TRIM39Q9HCM9 AC005005.4-201ENST00000623789 16698 ntBASIC5.96□□□□□ -1.45
TRIM39Q9HCM9 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM39Q9HCM9 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
TRIM39Q9HCM9 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 Y_RNA.18-201ENST00000362461 102 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 RNU6-920P-201ENST00000410926 92 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AL390774.1-201ENST00000411924 246 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 CEACAMP8-201ENST00000413902 580 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 RNGTTP1-201ENST00000420965 728 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC012519.1-201ENST00000424588 610 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 MED14P1-201ENST00000430517 648 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 HMGN1P2-201ENST00000445197 310 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 DDX39BP2-208ENST00000453923 258 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC010307.1-201ENST00000467206 836 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 NCOR1P1-202ENST00000486162 291 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC104685.1-201ENST00000502445 371 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC025458.1-201ENST00000506046 166 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC109471.1-201ENST00000511631 612 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 RPL12P22-201ENST00000519073 490 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AP001207.1-201ENST00000524051 481 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AL138895.2-201ENST00000603019 178 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC112220.3-201ENST00000605502 502 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 RN7SKP299-201ENST00000606679 301 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AL353600.1-201ENST00000608148 251 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC108673.3-201ENST00000609183 335 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 MIR6778-201ENST00000617912 73 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AL136228.1-201ENST00000622221 319 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AC129778.1-202ENST00000623812 261 ntBASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM39Q9HCM9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms