Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU7-180P-201ENST00000459240 63 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC109454.1-201ENST00000471205 498 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 RN7SL12P-201ENST00000473849 290 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 PRMT5P1-201ENST00000514351 598 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 DNM1P34-202ENST00000567850 315 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC096708.1-201ENST00000584419 658 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 MIR6745-201ENST00000612694 127 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 RNVU1-19-201ENST00000613023 167 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 MIR6761-201ENST00000617899 72 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 PFN1P2-202ENST00000621347 397 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 PLCE1P1-201ENST00000622094 305 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC130448.2-201ENST00000624082 374 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AL022334.1-201ENST00000417397 1726 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 NF1P8-201ENST00000415351 1461 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
USB1Q9BQ65 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
USB1Q9BQ65 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.02□□□□□ -1.28
USB1Q9BQ65 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC032011.1-201ENST00000611703 1549 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 HSPA8P18-201ENST00000439846 1928 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL121835.2-201ENST00000624253 3502 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL138847.1-201ENST00000258651 546 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 Y_RNA.22-201ENST00000362492 102 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 Y_RNA.167-201ENST00000363735 109 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 SNORA62.1-201ENST00000364287 154 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 RN7SKP76-201ENST00000364419 323 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL359715.1-201ENST00000404330 555 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC080125.1-201ENST00000414888 684 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 RPL14P5-201ENST00000436474 730 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 RPL23AP74-201ENST00000437246 471 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 PCNPP5-201ENST00000452246 481 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL049714.1-201ENST00000466686 347 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 RPL7P43-201ENST00000478876 753 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC068781.1-201ENST00000488231 618 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 Y_RNA.654-201ENST00000497848 106 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC107385.1-201ENST00000507985 778 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 IGHVIII-82-201ENST00000522058 250 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 MRPL40P1-201ENST00000542687 604 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 MIR3672-201ENST00000584290 82 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL158151.4-201ENST00000600965 507 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL121612.2-201ENST00000612261 482 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 TUG1_3.1-201ENST00000616187 237 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms