Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC005034.4-201ENST00000603612 899 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC079880.2-201ENST00000603790 1213 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC091965.4-201ENST00000607691 587 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AF250324.2-201ENST00000608299 610 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC022079.2-201ENST00000619739 566 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 AP005432.1-201ENST00000580891 3485 ntBASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDK5RAP1Q96SZ6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 Y_RNA.41-201ENST00000362646 102 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 RNU6-1005P-201ENST00000384519 107 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 OR3A2-201ENST00000408891 1076 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 USP9YP33-201ENST00000412220 421 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 RPS6P23-201ENST00000413224 722 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AL133173.1-201ENST00000423458 397 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC019178.2-201ENST00000423595 505 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 DEFB130D-201ENST00000426866 237 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 USP24P1-201ENST00000433802 779 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 ATP5LP5-201ENST00000483050 299 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC011411.1-201ENST00000509592 876 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC007225.2-201ENST00000562529 256 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 H3F3BP2-201ENST00000583907 357 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 MIR3611-201ENST00000584484 83 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 SLC25A36P1-201ENST00000590111 465 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AL031985.2-201ENST00000600955 480 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AL158063.1-201ENST00000615349 536 ntBASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP1Q96SZ6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 BCORP1-203ENST00000513194 5093 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 RN7SKP124-201ENST00000364730 341 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 RNU1-136P-201ENST00000384181 164 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 MIR551A-201ENST00000385042 96 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 U3.25-201ENST00000391209 220 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AL136310.1-201ENST00000404926 654 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 MTND4P20-201ENST00000424125 869 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms