Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 TMCC1P1-201ENST00000518897 1980 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 SAMMSON-210ENST00000641260 1308 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 RNU6-797P-201ENST00000363101 109 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP88-201ENST00000365560 109 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AL139805.1-201ENST00000407837 289 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC093698.1-201ENST00000423843 571 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC007559.1-201ENST00000428736 355 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 SKP1P3-201ENST00000429280 487 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC108479.1-201ENST00000431142 427 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC094019.1-201ENST00000434678 472 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 VN1R10P-201ENST00000447106 875 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 PAXBP1P1-201ENST00000449315 447 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 DNAJB5P1-201ENST00000454004 806 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 RN7SL168P-201ENST00000463821 279 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC128716.1-201ENST00000475129 166 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 MARK2P8-201ENST00000476069 952 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 RN7SL326P-201ENST00000477493 296 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 OR4D12P-201ENST00000509361 911 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 ZNF519P4-201ENST00000514008 125 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 HMGB1P23-201ENST00000518743 568 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 ADI1P3-201ENST00000549509 470 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AL121579.1-201ENST00000555129 305 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 SEPT7P9-203ENST00000604116 343 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC005332.6-201ENST00000613178 446 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC024255.1-201ENST00000614376 102 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC007014.2-201ENST00000615581 479 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 uc_338.31-201ENST00000615595 186 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 MIR7159-201ENST00000620587 66 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 MIR6806-201ENST00000622141 64 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AL683826.1-201ENST00000624104 627 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC111152.1-202ENST00000635848 339 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AKAP17BP-201ENST00000431706 2719 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 AL354854.1-201ENST00000455940 1363 ntBASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCHD1Q96NR3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC079753.1-201ENST00000623243 3868 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms