Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 DBIP1-201ENST00000401435 260 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RN7SKP222-201ENST00000410651 315 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 HMGB3P31-201ENST00000413333 595 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 LIPT1P1-201ENST00000415870 1186 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 HMGN2P27-201ENST00000427352 270 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC124944.2-201ENST00000429866 1242 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 FAM96AP1-201ENST00000430879 482 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC090018.1-201ENST00000434369 367 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 PTMAP6-201ENST00000439110 327 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC000041.1-201ENST00000439655 175 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 MTCO1P53-201ENST00000441633 699 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RPS11P7-201ENST00000442125 465 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 EXOSC3P1-201ENST00000448649 500 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AL035407.2-201ENST00000454090 378 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC079168.1-201ENST00000458741 345 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RNU7-27P-201ENST00000459281 62 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC096741.1-201ENST00000472250 846 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC092754.1-201ENST00000472975 479 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC093270.2-201ENST00000486157 792 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RN7SL30P-201ENST00000488416 306 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC026414.1-201ENST00000504046 698 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 IMPA1P1-201ENST00000510718 842 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC016559.2-201ENST00000510759 359 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 HMGN1P9-201ENST00000515212 298 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC091163.3-201ENST00000518269 1144 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 HMGB1P1-201ENST00000522557 636 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 OR5AK3P-201ENST00000527486 1297 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 NPM1P35-201ENST00000533043 868 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC025260.1-201ENST00000548858 430 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RN7SL290P-201ENST00000578661 300 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AL512329.2-201ENST00000607350 548 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 AC244107.2-201ENST00000611773 76 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 CCT8P1-201ENST00000413611 1657 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC104623.2-202ENST00000623477 4002 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AL078621.3-201ENST00000623707 2042 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AL450345.1-202ENST00000605741 3881 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 RNU1-43P-201ENST00000365052 165 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 DNAJC19P6-201ENST00000401853 280 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AL139148.1-201ENST00000427122 680 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 FTLP19-201ENST00000433300 394 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC090804.1-201ENST00000448870 490 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 FAR2P1-206ENST00000449736 709 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC111193.1-201ENST00000504097 155 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms