Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC104118.1-201ENST00000607625 1589 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS33AQ96AX1 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS33AQ96AX1 CASC19-204ENST00000641001 2055 ntBASIC4.9□□□□□ -1.62
VPS33AQ96AX1 CYP1D1P-201ENST00000416662 1433 ntBASIC4.9□□□□□ -1.62
VPS33AQ96AX1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS33AQ96AX1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.9□□□□□ -1.62
VPS33AQ96AX1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
VPS33AQ96AX1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 RNU6-796P-201ENST00000391086 107 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC023128.2-201ENST00000420880 1223 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AL606495.1-201ENST00000422100 813 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 TMX2P1-201ENST00000436507 708 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 RPS29P10-201ENST00000439197 166 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 MTND6P18-201ENST00000439477 513 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AL031584.1-201ENST00000447169 754 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC091180.1-201ENST00000462104 372 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC084754.1-201ENST00000463466 464 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AL161747.1-201ENST00000480068 358 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 RN7SL741P-201ENST00000482473 289 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC073073.1-201ENST00000493920 463 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 RN7SL649P-201ENST00000496974 275 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 PFN1P8-201ENST00000497012 543 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC138938.1-201ENST00000515431 782 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 RNA5SP303-201ENST00000516192 130 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 OR5AK3P-201ENST00000527486 1297 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC104229.1-201ENST00000561364 255 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC010245.2-201ENST00000606908 1167 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 AC009318.3-201ENST00000616916 503 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 DDX18P3-201ENST00000404856 2007 ntBASIC4.9□□□□□ -1.63
VPS33AQ96AX1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VPS33AQ96AX1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 RNU1-77P-201ENST00000390868 162 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC013442.1-201ENST00000397347 228 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 PTGES3P2-201ENST00000407942 482 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 MTND2P11-201ENST00000423638 648 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC073069.1-201ENST00000428657 441 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AL450263.2-201ENST00000439400 589 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AP000281.1-201ENST00000444036 316 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 HMGN1P36-201ENST00000446623 298 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AL356981.1-201ENST00000454879 684 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 RPEP1-201ENST00000504507 658 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC112191.2-201ENST00000522428 333 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AGGF1P9-201ENST00000561884 913 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 MIR4716-201ENST00000579628 84 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC006946.3-201ENST00000609791 756 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AL163051.2-201ENST00000618976 735 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 CR392039.4-201ENST00000624968 501 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms