Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC079298.1-201ENST00000625026 1619 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 OR9G4-201ENST00000302957 984 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 ATP5F1P6-201ENST00000402768 767 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 MIR1182-201ENST00000408363 97 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 PCNPP4-201ENST00000414817 517 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC092570.3-201ENST00000420113 693 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC245028.1-201ENST00000423259 256 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 MTCO1P51-201ENST00000427672 1060 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 USP9YP9-201ENST00000429406 715 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 Z80107.2-201ENST00000445127 392 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 TRY2P-201ENST00000448860 689 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC006463.2-201ENST00000473326 348 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 RN7SL591P-201ENST00000496150 292 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 RPS24P16-201ENST00000497294 392 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 NAMPTP2-201ENST00000505629 1115 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC010460.2-201ENST00000509054 677 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC103833.1-201ENST00000517442 172 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 MTND1P8-201ENST00000571424 950 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 AL050303.3-201ENST00000613704 284 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AP003400.3-201ENST00000624904 346 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC010608.3-201ENST00000625048 527 ntBASIC4.8□□□□□ -1.64
TM9SF4Q92544 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TM9SF4Q92544 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF4Q92544 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF4Q92544 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF4Q92544 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF4Q92544 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF4Q92544 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF4Q92544 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF4Q92544 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF4Q92544 U3.3-201ENST00000362986 216 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 RN7SKP149-201ENST00000363008 344 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 RNU6-650P-201ENST00000365658 111 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 RN7SKP97-201ENST00000410966 333 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 GJA6P-201ENST00000415117 1042 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 ARL2BPP3-201ENST00000421226 480 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 AL360081.1-201ENST00000428299 555 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 AC124944.2-201ENST00000429866 1242 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 RPS26P4-201ENST00000431743 355 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 AC046176.1-201ENST00000435260 1170 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 KNOP1P3-201ENST00000446933 426 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 RPL7P16-201ENST00000479738 738 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 AC098583.1-201ENST00000480875 255 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 HMGN2P25-201ENST00000486956 268 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 RN7SL205P-201ENST00000490174 284 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 CEACAMP10-202ENST00000495431 496 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF4Q92544 AC110775.1-201ENST00000513721 462 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 RNU6-334P-201ENST00000517072 102 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.79□□□□□ -1.64
TM9SF4Q92544 AC006349.1-201ENST00000555526 235 ntBASIC4.79□□□□□ -1.64
TM9SF4Q92544 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms