Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 RNA5SP183-201ENST00000362452 119 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 RNU6-31P-201ENST00000384388 108 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 RN7SKP125-201ENST00000410481 302 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 RPL35AP24-201ENST00000413846 330 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC093084.1-201ENST00000424233 687 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC108075.1-201ENST00000424692 529 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 FABP7P2-201ENST00000429946 379 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AL512661.1-201ENST00000434586 1253 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 RNFT1P2-201ENST00000443064 757 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 RN7SKP157-201ENST00000516174 282 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC024940.3-201ENST00000538551 316 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC025918.2-201ENST00000558683 763 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 MIR1269B-201ENST00000580405 75 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 FKBP1AP1-201ENST00000594588 318 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AC112503.2-201ENST00000609005 552 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 CYP4Z2P-201ENST00000423332 1512 ntBASIC5□□□□□ -1.61
SLC44A1Q8WWI5 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SLC44A1Q8WWI5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 DDX18P5-201ENST00000534547 1306 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AL133268.1-201ENST00000405676 1401 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AL359715.4-201ENST00000606629 1436 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 SNORA70.10-201ENST00000384515 134 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 RNU6-1257P-201ENST00000384625 110 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AL592291.1-201ENST00000403830 352 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 BMS1P13-201ENST00000417301 885 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 MTND4LP13-201ENST00000425022 298 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 NMNAT1P2-201ENST00000435192 860 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 MRPL48P1-201ENST00000445390 636 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AL157827.1-201ENST00000447622 132 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 CLIC4P1-201ENST00000453177 535 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AC018635.1-201ENST00000468292 1030 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 CBX3P2-202ENST00000583365 535 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AC079880.2-201ENST00000603790 1213 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AF129408.1-201ENST00000608767 431 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AC104763.3-201ENST00000613765 618 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AL034370.1-201ENST00000397254 1590 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 SCARNA15-201ENST00000607520 4325 ntBASIC4.99□□□□□ -1.61
SLC44A1Q8WWI5 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A1Q8WWI5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A1Q8WWI5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SLC44A1Q8WWI5 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A1Q8WWI5 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A1Q8WWI5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A1Q8WWI5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms