Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPL10P17-201ENST00000453852 316 ntBASIC6.89□□□□□ -1.31
VPS8Q8N3P4 RN7SL303P-201ENST00000469773 251 ntBASIC6.89□□□□□ -1.31
VPS8Q8N3P4 DEFB109F-201ENST00000491870 277 ntBASIC6.89□□□□□ -1.31
VPS8Q8N3P4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 FP325313.1-201ENST00000638228 703 ntBASIC6.89□□□□□ -1.31
VPS8Q8N3P4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 RPS20P14-201ENST00000412545 360 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 VDAC1P9-201ENST00000412766 841 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 NRBF2P2-201ENST00000413087 861 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AC093267.1-201ENST00000489176 961 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AC108475.1-201ENST00000507880 950 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 OR5BC1P-201ENST00000529327 739 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 SNORD91B-202ENST00000608459 222 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AC068831.8-201ENST00000620171 435 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AL158163.1-201ENST00000603915 1649 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AP000756.2-201ENST00000624168 2567 ntBASIC6.88□□□□□ -1.31
VPS8Q8N3P4 AC099654.3-201ENST00000447087 1546 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 RNU1-132P-201ENST00000364300 164 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 MFSD13B-201ENST00000420133 1290 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AL157831.1-201ENST00000426134 473 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 PPIAP13-201ENST00000434706 478 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 NUTF2P7-201ENST00000453086 375 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AC008958.1-201ENST00000511047 682 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AC020910.2-201ENST00000603635 610 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AC008966.2-201ENST00000606157 453 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 MIR6716-201ENST00000613413 80 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AL445567.2-201ENST00000618935 498 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AC008013.2-202ENST00000637965 364 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AL139254.3-201ENST00000641097 674 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AL672167.1-205ENST00000641112 3080 ntBASIC6.87□□□□□ -1.31
VPS8Q8N3P4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VPS8Q8N3P4 AL161909.1-201ENST00000397390 712 ntBASIC6.86□□□□□ -1.31
VPS8Q8N3P4 SNORA11-201ENST00000408789 128 ntBASIC6.86□□□□□ -1.31
VPS8Q8N3P4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 VN1R32P-201ENST00000452234 905 ntBASIC6.86□□□□□ -1.31
VPS8Q8N3P4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 AP000619.2-201ENST00000546014 969 ntBASIC6.86□□□□□ -1.31
VPS8Q8N3P4 AL590392.1-201ENST00000604960 446 ntBASIC6.86□□□□□ -1.31
VPS8Q8N3P4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.86□□□□□ -1.31
VPS8Q8N3P4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 EOGT-210ENST00000615922 1931 ntBASIC6.86□□□□□ -1.31
VPS8Q8N3P4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VPS8Q8N3P4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 RPL23AP26-201ENST00000412728 464 ntBASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AC011933.1-201ENST00000413334 321 ntBASIC6.85□□□□□ -1.31
VPS8Q8N3P4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AC116533.1-201ENST00000459748 321 ntBASIC6.85□□□□□ -1.31
VPS8Q8N3P4 RN7SL812P-201ENST00000493791 279 ntBASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AC104164.2-201ENST00000496953 495 ntBASIC6.85□□□□□ -1.31
VPS8Q8N3P4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 RN7SKP46-201ENST00000515942 234 ntBASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms