Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MTCO1P11-201ENST00000429111 1528 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC092447.10-201ENST00000620607 1652 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 RNU4-1-201ENST00000363925 141 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 SNORA51.6-201ENST00000384151 125 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 MIR106B-201ENST00000385301 82 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL034417.1-201ENST00000399343 800 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 EIF5P1-201ENST00000400019 1231 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 CNN3P1-201ENST00000401596 935 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 RPL7P58-201ENST00000402913 758 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL354719.1-201ENST00000406535 843 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 RNU2-5P-201ENST00000410533 180 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 RN7SKP140-201ENST00000411196 284 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC078974.1-201ENST00000411597 223 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 GSTM3P2-201ENST00000412746 530 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 PRELID3BP11-201ENST00000414230 479 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC004986.1-201ENST00000414855 607 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL358942.1-201ENST00000418595 1178 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 RPL35AP12-201ENST00000425362 338 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ANXA2P2-201ENST00000435128 1020 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AP000936.3-201ENST00000438127 255 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC231532.1-201ENST00000438584 312 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 USP9YP15-201ENST00000442391 422 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC239860.1-201ENST00000444680 1270 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 NIPA2P5-201ENST00000452282 464 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC233279.1-201ENST00000455300 423 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AP1S2P1-201ENST00000457344 379 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 RN7SL815P-201ENST00000470970 290 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC010587.1-201ENST00000505809 469 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 PABPC1P1-201ENST00000506347 591 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 PCBP2P3-201ENST00000509726 843 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC126177.6-201ENST00000550420 1009 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL121821.2-201ENST00000556081 394 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL355375.2-201ENST00000574825 175 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 LARP7P2-201ENST00000575306 125 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 MIR3118-1-201ENST00000581787 76 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC243960.4-201ENST00000600532 288 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC129492.5-201ENST00000603489 315 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 OR6L2P-201ENST00000608207 925 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC018628.1-201ENST00000624147 3819 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 RBPJP2-201ENST00000618187 1444 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RNA5SP161-201ENST00000363871 115 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RNU1-85P-201ENST00000364127 164 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms