Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC234782.5-201ENST00000617723 324 ntBASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 FRG1EP-201ENST00000634469 770 ntBASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
LINC00346Q8IVM7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 LINC01109-201ENST00000603837 3081 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AL512646.1-201ENST00000269395 1077 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 MIR133B-201ENST00000362210 119 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 RNA5SP319-201ENST00000362768 119 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 U6.112-201ENST00000384129 70 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 HSPA8P15-201ENST00000401676 786 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 RPL7P4-203ENST00000430239 730 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 HSFY7P-201ENST00000432672 318 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC023347.2-201ENST00000433994 462 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 HSFY8P-201ENST00000437934 318 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 MTND6P18-201ENST00000439477 513 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC000041.1-201ENST00000439655 175 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 RPL5P25-201ENST00000441148 775 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AL592437.1-201ENST00000443781 492 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC073909.1-201ENST00000447112 999 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 OR52E3P-201ENST00000452083 936 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 HSFY5P-201ENST00000453726 309 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC008280.2-201ENST00000455473 307 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 RPS27AP2-201ENST00000457576 465 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC104689.1-201ENST00000473356 768 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC090638.1-201ENST00000498296 909 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 IGBP1P5-201ENST00000507524 1000 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC147055.3-201ENST00000510547 851 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC098976.1-201ENST00000513014 541 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 MTATP6P9-201ENST00000515039 680 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC022360.1-201ENST00000521058 340 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC104115.2-201ENST00000523026 687 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC005341.1-201ENST00000571086 708 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 MIR1273E-201ENST00000581165 102 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 PRPF19P1-201ENST00000584766 898 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 FO393422.1-201ENST00000603908 708 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 BNIP3P4-201ENST00000604946 565 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC097504.2-201ENST00000608088 454 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC000068.2-201ENST00000608816 460 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC124016.2-201ENST00000610058 665 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC091932.2-201ENST00000623014 291 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AC002525.1-201ENST00000624392 1622 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms