Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 RN7SKP160-201ENST00000363804 340 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 RNU1-82P-201ENST00000390851 165 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 U3.25-201ENST00000391209 220 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AP002530.1-201ENST00000405705 684 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC073136.2-201ENST00000417282 849 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 CYCSP10-201ENST00000417973 294 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC004690.1-201ENST00000418216 328 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC016724.1-201ENST00000453215 421 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 OR7L1P-201ENST00000456181 380 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC090142.1-201ENST00000465776 462 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC072052.1-201ENST00000496556 306 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 RPL7L1P4-201ENST00000513004 707 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 RNU1-6P-201ENST00000516290 144 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC100770.1-201ENST00000532310 322 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC073137.1-201ENST00000605636 634 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC093799.2-201ENST00000610062 578 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC008115.4-201ENST00000619780 775 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 OR51H2P-202ENST00000641424 3046 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AC091046.3-201ENST00000631455 1574 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 RN7SKP162-201ENST00000363605 345 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 U3.30-201ENST00000391308 210 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 RCC2P2-201ENST00000422174 918 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 CHEK2P5-201ENST00000423877 246 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 RPL7P11-201ENST00000437586 658 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 EIF2S2P5-201ENST00000457635 968 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 PSMC1P13-201ENST00000458195 985 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 RPL7AP28-201ENST00000464513 571 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 RPS18P6-201ENST00000476880 458 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 RN7SL101P-201ENST00000496350 279 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AK4P6-201ENST00000505168 528 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC090151.1-201ENST00000520784 730 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC092490.3-201ENST00000545370 572 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 GLRXP2-201ENST00000555594 321 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC008759.1-201ENST00000589783 983 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC020910.3-201ENST00000603701 874 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC011453.2-201ENST00000603737 729 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 IMMP1LP3-201ENST00000604197 224 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AL353726.1-201ENST00000614041 1000 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC023509.5-201ENST00000617434 807 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AL669942.2-201ENST00000620352 697 ntBASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NUDCD3Q8IVD9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 RNU1-108P-201ENST00000362556 161 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms