Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MED6P1-201ENST00000439659 713 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 RPL23AP23-201ENST00000452590 471 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 Z92846.1-201ENST00000456203 268 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC074386.1-201ENST00000476560 767 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC107398.1-201ENST00000486904 505 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 GTF2F2P1-201ENST00000511083 675 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC092709.1-201ENST00000521355 1045 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC090819.1-201ENST00000523800 1111 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 MIR4660-201ENST00000583549 74 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AL512624.1-201ENST00000613638 469 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AL138960.2-201ENST00000625145 535 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC135068.12-201ENST00000637370 931 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 RARSP1-201ENST00000542842 1418 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 TCP1P3-201ENST00000414406 1498 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC006210.2-201ENST00000367074 1545 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC011493.1-201ENST00000596753 1632 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC092747.4-201ENST00000620519 1861 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 AC009951.1-201ENST00000623674 2614 ntBASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP54Q7Z3B4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AL590763.1-201ENST00000398297 1545 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 VN2R3P-201ENST00000422626 1412 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 RNU1-43P-201ENST00000365052 165 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 HYALP1-201ENST00000417674 1279 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 NANOGP4-201ENST00000427230 913 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 UBE2V1P6-201ENST00000430840 422 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 PTP4A1P3-201ENST00000433661 420 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 CLUHP1-201ENST00000435012 1190 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 RPL5P30-201ENST00000465511 891 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC079841.1-201ENST00000481228 950 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 SYT14P1-201ENST00000481459 721 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 UBA52P7-201ENST00000486088 380 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC072052.1-201ENST00000496556 306 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC006427.1-201ENST00000514359 712 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 RNA5SP34-201ENST00000516887 130 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 OSBPL9P3-201ENST00000534523 595 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC092451.2-201ENST00000538746 658 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC073137.1-201ENST00000605636 634 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC126915.2-201ENST00000610957 190 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 AC000123.3-201ENST00000624029 4975 ntBASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NUP54Q7Z3B4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
NUP54Q7Z3B4 AC011755.1-201ENST00000623763 2049 ntBASIC4.84□□□□□ -1.64
NUP54Q7Z3B4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC023421.1-201ENST00000590535 1785 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms