Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN1BQ07699 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN1BQ07699 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN1BQ07699 PANDAR-201ENST00000629595 1506 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN1BQ07699 RNA5SP27-201ENST00000363839 119 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 RNA5SP510-201ENST00000364697 99 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 RNA5SP131-201ENST00000365452 119 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN1BQ07699 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SCN1BQ07699 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN1BQ07699 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AL606495.1-201ENST00000422100 813 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AC068135.1-201ENST00000446164 246 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 BX842559.2-201ENST00000451418 605 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 AL445665.1-202ENST00000452436 324 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 AL445433.1-201ENST00000457507 257 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 GYG1P1-201ENST00000460864 698 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AL035404.1-201ENST00000497982 568 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN1BQ07699 RNA5SP249-201ENST00000516127 99 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 CYCSP22-201ENST00000517555 339 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.63□□□□□ -1.67
SCN1BQ07699 OR4A2P-201ENST00000527276 913 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN1BQ07699 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN1BQ07699 RN7SL52P-201ENST00000584271 284 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 AC011477.5-201ENST00000586571 259 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN1BQ07699 RN7SL787P-201ENST00000613000 284 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 AC008115.3-201ENST00000614874 549 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
SCN1BQ07699 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SCN1BQ07699 YES1P1-201ENST00000418510 1628 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 AC008432.1-201ENST00000615912 1320 ntBASIC4.63□□□□□ -1.67
SCN1BQ07699 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
SCN1BQ07699 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCN1BQ07699 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN1BQ07699 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN1BQ07699 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN1BQ07699 AL049555.1-201ENST00000562834 1933 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC091046.3-201ENST00000631455 1574 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN1BQ07699 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN1BQ07699 RNU6-609P-201ENST00000365459 107 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 RPS3P2-201ENST00000421346 701 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 IPPKP1-201ENST00000422501 768 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AL133173.1-201ENST00000423458 397 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 RPL30P3-201ENST00000424262 333 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN1BQ07699 CEACAMP1-201ENST00000434624 1035 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN1BQ07699 RPS7P5-201ENST00000441482 581 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN1BQ07699 HMGN1P2-201ENST00000445197 310 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 RPL36AP39-201ENST00000445859 318 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 VDAC2P4-201ENST00000452925 711 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 RN7SL814P-201ENST00000487715 300 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.62□□□□□ -1.67
SCN1BQ07699 FTH1P24-201ENST00000503502 462 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.62□□□□□ -1.67
SCN1BQ07699 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN1BQ07699 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN1BQ07699 BUD31P1-201ENST00000521828 359 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN1BQ07699 COX6B1P6-201ENST00000522347 255 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AC112191.2-201ENST00000522428 333 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.62□□□□□ -1.67
SCN1BQ07699 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC125494.3-201ENST00000602759 455 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AL499605.1-201ENST00000604628 403 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AC010857.1-201ENST00000606398 594 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AC245100.7-201ENST00000609678 442 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 AC016717.3-201ENST00000624730 554 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN1BQ07699 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.62□□□□□ -1.67
SCN1BQ07699 AC023421.1-201ENST00000590535 1785 ntBASIC4.62□□□□□ -1.67
SCN1BQ07699 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN1BQ07699 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN1BQ07699 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms