Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.16□□□□□ -1.74
LSM6P62312 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LSM6P62312 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.74
LSM6P62312 AL031119.1-201ENST00000404707 1879 ntBASIC4.15□□□□□ -1.74
LSM6P62312 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.15□□□□□ -1.74
LSM6P62312 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LSM6P62312 MTND4P26-201ENST00000415971 1359 ntBASIC4.15□□□□□ -1.74
LSM6P62312 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LSM6P62312 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
LSM6P62312 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.15□□□□□ -1.74
LSM6P62312 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LSM6P62312 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
LSM6P62312 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
LSM6P62312 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LSM6P62312 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.15□□□□□ -1.75
LSM6P62312 IL6STP1-201ENST00000346911 1020 ntBASIC4.15□□□□□ -1.75
LSM6P62312 RN7SKP115-201ENST00000363177 317 ntBASIC4.15□□□□□ -1.75
LSM6P62312 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LSM6P62312 MIR105-2-201ENST00000385083 81 ntBASIC4.15□□□□□ -1.75
LSM6P62312 MIR921-201ENST00000401133 56 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AL589647.1-201ENST00000402485 466 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AL591848.1-201ENST00000413092 322 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.15□□□□□ -1.75
LSM6P62312 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM6P62312 COX6B1P1-201ENST00000415962 213 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AL158073.1-201ENST00000426848 1104 ntBASIC4.15□□□□□ -1.75
LSM6P62312 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LSM6P62312 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.15□□□□□ -1.75
LSM6P62312 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.15□□□□□ -1.75
LSM6P62312 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.15□□□□□ -1.75
LSM6P62312 NRBF2P3-201ENST00000432731 865 ntBASIC4.15□□□□□ -1.75
LSM6P62312 RPS20P1-201ENST00000434853 354 ntBASIC4.15□□□□□ -1.75
LSM6P62312 SUMO2P1-206ENST00000445436 284 ntBASIC4.15□□□□□ -1.75
LSM6P62312 OR1H1P-201ENST00000448731 937 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC090142.1-201ENST00000465776 462 ntBASIC4.15□□□□□ -1.75
LSM6P62312 RPL7P16-201ENST00000479738 738 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC004453.1-201ENST00000487895 408 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC091868.1-201ENST00000508746 304 ntBASIC4.15□□□□□ -1.75
LSM6P62312 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.15□□□□□ -1.75
LSM6P62312 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.15□□□□□ -1.75
LSM6P62312 AP000676.2-201ENST00000529711 301 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC005000.1-201ENST00000536192 288 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.15□□□□□ -1.75
LSM6P62312 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM6P62312 HMGB3P26-201ENST00000560051 582 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM6P62312 MTND2P13-201ENST00000577438 1039 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.15□□□□□ -1.75
LSM6P62312 MIR4646-201ENST00000580775 63 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.15□□□□□ -1.75
LSM6P62312 AC130352.1-201ENST00000602979 661 ntBASIC4.15□□□□□ -1.75
LSM6P62312 AC005084.1-201ENST00000605160 304 ntBASIC4.15□□□□□ -1.75
LSM6P62312 OR7A19P-201ENST00000608051 733 ntBASIC4.15□□□□□ -1.75
LSM6P62312 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LSM6P62312 SNX18P1Y-201ENST00000616231 511 ntBASIC4.15□□□□□ -1.75
LSM6P62312 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LSM6P62312 AC234782.5-201ENST00000617723 324 ntBASIC4.15□□□□□ -1.75
LSM6P62312 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.15□□□□□ -1.75
LSM6P62312 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.15□□□□□ -1.75
LSM6P62312 AL442639.1-201ENST00000625030 1899 ntBASIC4.15□□□□□ -1.75
LSM6P62312 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
LSM6P62312 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LSM6P62312 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LSM6P62312 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.15□□□□□ -1.75
LSM6P62312 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.15□□□□□ -1.75
LSM6P62312 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LSM6P62312 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM6P62312 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM6P62312 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LSM6P62312 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LSM6P62312 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LSM6P62312 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LSM6P62312 AC074029.4-201ENST00000624796 1859 ntBASIC4.14□□□□□ -1.75
LSM6P62312 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.14□□□□□ -1.75
LSM6P62312 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM6P62312 SCN1A-220ENST00000641603 12506 ntBASIC4.14□□□□□ -1.75
LSM6P62312 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LSM6P62312 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM6P62312 RN7SKP149-201ENST00000363008 344 ntBASIC4.14□□□□□ -1.75
LSM6P62312 RNU6-984P-201ENST00000363236 109 ntBASIC4.14□□□□□ -1.75
LSM6P62312 AL645927.1-201ENST00000396783 406 ntBASIC4.14□□□□□ -1.75
LSM6P62312 HSPD1P16-201ENST00000402302 394 ntBASIC4.14□□□□□ -1.75
LSM6P62312 RN7SKP267-201ENST00000410381 285 ntBASIC4.14□□□□□ -1.75
LSM6P62312 RNA5SP146-201ENST00000410743 123 ntBASIC4.14□□□□□ -1.75
LSM6P62312 VDAC1P9-201ENST00000412766 841 ntBASIC4.14□□□□□ -1.75
LSM6P62312 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.14□□□□□ -1.75
LSM6P62312 AC098592.2-201ENST00000413158 265 ntBASIC4.14□□□□□ -1.75
LSM6P62312 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.14□□□□□ -1.75
LSM6P62312 VN1R31P-201ENST00000417498 730 ntBASIC4.14□□□□□ -1.75
LSM6P62312 GAPDHP49-201ENST00000421421 961 ntBASIC4.14□□□□□ -1.75
LSM6P62312 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.14□□□□□ -1.75
LSM6P62312 RPS26P47-201ENST00000427219 348 ntBASIC4.14□□□□□ -1.75
LSM6P62312 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.14□□□□□ -1.75
LSM6P62312 FHP1-201ENST00000442741 703 ntBASIC4.14□□□□□ -1.75
LSM6P62312 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms