Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RHBDL3P58872 RNA5SP87-201ENST00000384155 118 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 RNU6-481P-201ENST00000384194 107 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RHBDL3P58872 RN7SKP216-201ENST00000411050 312 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 Y_RNA.625-201ENST00000411256 107 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 RPL37P18-201ENST00000411602 243 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDL3P58872 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.14□□□□□ -1.43
RHBDL3P58872 BX323845.1-201ENST00000432417 179 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AL161722.2-201ENST00000434731 981 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC006994.1-201ENST00000438212 839 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC006466.1-201ENST00000438721 289 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDL3P58872 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AC090804.1-201ENST00000448870 490 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 MTND2P8-201ENST00000450555 1025 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AC092324.1-201ENST00000468671 324 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AL161747.1-201ENST00000480068 358 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 RPS12P31-201ENST00000491419 398 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 NPM1P28-201ENST00000492269 840 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDL3P58872 RNA5SP43-201ENST00000516559 110 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 SMARCE1P4-201ENST00000523647 241 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 OR7E128P-201ENST00000532736 1024 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AC018552.3-201ENST00000567416 561 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AC105254.2-201ENST00000603636 436 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC005084.1-201ENST00000605160 304 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 AC138907.10-201ENST00000623708 983 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC073342.3-201ENST00000624211 193 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDL3P58872 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RHBDL3P58872 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AL022323.4-201ENST00000623980 13120 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RHBDL3P58872 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.14□□□□□ -1.43
RHBDL3P58872 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDL3P58872 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RHBDL3P58872 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDL3P58872 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDL3P58872 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDL3P58872 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RHBDL3P58872 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RHBDL3P58872 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDL3P58872 AL035405.1-201ENST00000400795 710 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 HMGB3P18-201ENST00000406327 590 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RHBDL3P58872 CHEK2P3-201ENST00000416118 248 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 AC073069.1-201ENST00000428657 441 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDL3P58872 AC138761.5-201ENST00000433967 325 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDL3P58872 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDL3P58872 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDL3P58872 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDL3P58872 RN7SL189P-201ENST00000468631 289 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RHBDL3P58872 COX6B1P5-201ENST00000509843 249 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 BTF3P13-201ENST00000513224 490 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 RN7SKP260-201ENST00000516907 149 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 IGKV2-36-201ENST00000519999 223 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 HMGB1P1-201ENST00000522557 636 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RHBDL3P58872 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDL3P58872 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDL3P58872 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDL3P58872 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDL3P58872 PCNPP1-201ENST00000552501 511 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDL3P58872 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDL3P58872 GLRXP2-201ENST00000555594 321 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDL3P58872 MIR7853-201ENST00000584820 132 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 AL136370.1-201ENST00000608166 691 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDL3P58872 AC078880.5-201ENST00000617845 421 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 AL138955.1-201ENST00000622881 1040 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDL3P58872 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDL3P58872 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 CASC19-221ENST00000641309 1382 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDL3P58872 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RHBDL3P58872 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
RHBDL3P58872 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDL3P58872 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms