Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDX1P52945 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 AL359715.4-201ENST00000606629 1436 ntBASIC4.87□□□□□ -1.63
PDX1P52945 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 SDAD1P1-202ENST00000524156 2051 ntBASIC4.87□□□□□ -1.63
PDX1P52945 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 ADAM5-202ENST00000399789 1942 ntBASIC4.86□□□□□ -1.63
PDX1P52945 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 RNA5SP191-201ENST00000362585 102 ntBASIC4.86□□□□□ -1.63
PDX1P52945 RNA5SP223-201ENST00000365174 120 ntBASIC4.86□□□□□ -1.63
PDX1P52945 RNA5SP113-201ENST00000410486 84 ntBASIC4.86□□□□□ -1.63
PDX1P52945 COX5BP7-201ENST00000414780 274 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC093084.1-201ENST00000424233 687 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.86□□□□□ -1.63
PDX1P52945 AC007559.1-201ENST00000428736 355 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC091390.1-201ENST00000433904 331 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.86□□□□□ -1.63
PDX1P52945 OR7E125P-201ENST00000443450 846 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AL161722.1-201ENST00000446972 1032 ntBASIC4.86□□□□□ -1.63
PDX1P52945 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 AC069277.2-201ENST00000454211 432 ntBASIC4.86□□□□□ -1.63
PDX1P52945 NDUFA12P1-201ENST00000455914 406 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC078857.1-201ENST00000469870 667 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 OR11I1P-201ENST00000486033 954 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AL049874.2-201ENST00000492636 288 ntBASIC4.86□□□□□ -1.63
PDX1P52945 GAPDHP56-201ENST00000506031 988 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 HAUS1P3-201ENST00000523909 662 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.86□□□□□ -1.63
PDX1P52945 NMNAT1P1-201ENST00000554095 876 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC040958.1-201ENST00000561102 201 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AL391358.1-201ENST00000605342 190 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.86□□□□□ -1.63
PDX1P52945 AC245389.2-201ENST00000616023 576 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC242843.1-201ENST00000618702 573 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC095038.2-201ENST00000621464 1070 ntBASIC4.86□□□□□ -1.63
PDX1P52945 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PDX1P52945 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 TRIM51GP-201ENST00000534741 1350 ntBASIC4.86□□□□□ -1.63
PDX1P52945 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PDX1P52945 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 AL592494.2-201ENST00000425455 1548 ntBASIC4.86□□□□□ -1.63
PDX1P52945 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDX1P52945 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.86□□□□□ -1.63
PDX1P52945 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 AC068870.3-201ENST00000625077 2536 ntBASIC4.85□□□□□ -1.63
PDX1P52945 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PDX1P52945 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PDX1P52945 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PDX1P52945 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PDX1P52945 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 RNU6-650P-201ENST00000365658 111 ntBASIC4.85□□□□□ -1.63
PDX1P52945 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 MT-TP-201ENST00000387461 68 ntBASIC4.85□□□□□ -1.63
PDX1P52945 RPL21P67-201ENST00000402896 478 ntBASIC4.85□□□□□ -1.63
PDX1P52945 RNU2-50P-201ENST00000410494 143 ntBASIC4.85□□□□□ -1.63
PDX1P52945 RN7SKP100-201ENST00000411258 284 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AC119751.6-201ENST00000416712 186 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AL121878.1-201ENST00000418638 859 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AC016712.1-201ENST00000431088 378 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.85□□□□□ -1.63
PDX1P52945 GSTA7P-201ENST00000438425 448 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AL354714.3-201ENST00000447284 493 ntBASIC4.85□□□□□ -1.63
PDX1P52945 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.85□□□□□ -1.63
PDX1P52945 NIFKP7-201ENST00000503365 834 ntBASIC4.85□□□□□ -1.63
PDX1P52945 MYL12BP2-201ENST00000503948 512 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.85□□□□□ -1.63
PDX1P52945 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDX1P52945 AC100784.1-201ENST00000522790 310 ntBASIC4.85□□□□□ -1.63
PDX1P52945 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms