Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.85□□□□□ -1.31
USP11P51784 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.85□□□□□ -1.31
USP11P51784 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 SUGT1P2-201ENST00000379452 992 ntBASIC6.85□□□□□ -1.31
USP11P51784 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
USP11P51784 MYL6P5-201ENST00000412707 459 ntBASIC6.85□□□□□ -1.31
USP11P51784 AC138393.2-201ENST00000414742 246 ntBASIC6.85□□□□□ -1.31
USP11P51784 AC015977.1-201ENST00000418887 292 ntBASIC6.85□□□□□ -1.31
USP11P51784 UBTFL3-201ENST00000418934 1024 ntBASIC6.85□□□□□ -1.31
USP11P51784 OR8F1P-201ENST00000425243 930 ntBASIC6.85□□□□□ -1.31
USP11P51784 AC245884.2-201ENST00000426257 404 ntBASIC6.85□□□□□ -1.31
USP11P51784 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.85□□□□□ -1.31
USP11P51784 CNOT7P1-201ENST00000429006 852 ntBASIC6.85□□□□□ -1.31
USP11P51784 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.85□□□□□ -1.31
USP11P51784 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.85□□□□□ -1.31
USP11P51784 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.85□□□□□ -1.31
USP11P51784 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.85□□□□□ -1.31
USP11P51784 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
USP11P51784 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.85□□□□□ -1.31
USP11P51784 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.85□□□□□ -1.31
USP11P51784 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
USP11P51784 RN7SKP238-201ENST00000516483 249 ntBASIC6.85□□□□□ -1.31
USP11P51784 RNA5SP340-201ENST00000517132 107 ntBASIC6.85□□□□□ -1.31
USP11P51784 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.85□□□□□ -1.31
USP11P51784 AC005363.1-201ENST00000530779 351 ntBASIC6.85□□□□□ -1.31
USP11P51784 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.85□□□□□ -1.31
USP11P51784 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.85□□□□□ -1.31
USP11P51784 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.85□□□□□ -1.31
USP11P51784 AC090826.1-203ENST00000569235 490 ntBASIC6.85□□□□□ -1.31
USP11P51784 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.85□□□□□ -1.31
USP11P51784 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 AC068276.1-201ENST00000605793 379 ntBASIC6.85□□□□□ -1.31
USP11P51784 MIR6809-201ENST00000612189 116 ntBASIC6.85□□□□□ -1.31
USP11P51784 AC104260.1-201ENST00000616660 539 ntBASIC6.85□□□□□ -1.31
USP11P51784 RMST_5.1-201ENST00000618704 126 ntBASIC6.85□□□□□ -1.31
USP11P51784 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 AC022509.4-201ENST00000621404 572 ntBASIC6.85□□□□□ -1.31
USP11P51784 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 AC092724.1-201ENST00000624623 3397 ntBASIC6.85□□□□□ -1.31
USP11P51784 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
USP11P51784 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
USP11P51784 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USP11P51784 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
USP11P51784 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.84□□□□□ -1.31
USP11P51784 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.84□□□□□ -1.31
USP11P51784 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.84□□□□□ -1.31
USP11P51784 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.84□□□□□ -1.31
USP11P51784 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.84□□□□□ -1.31
USP11P51784 AC092326.2-201ENST00000624772 1561 ntBASIC6.84□□□□□ -1.31
USP11P51784 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
USP11P51784 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 OR1L1-202ENST00000373686 1083 ntBASIC6.84□□□□□ -1.31
USP11P51784 RNU6-116P-201ENST00000384042 109 ntBASIC6.84□□□□□ -1.31
USP11P51784 RNU6-31P-201ENST00000384388 108 ntBASIC6.84□□□□□ -1.31
USP11P51784 RPL17P50-201ENST00000396131 546 ntBASIC6.84□□□□□ -1.31
USP11P51784 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 ARL4AP5-201ENST00000404372 599 ntBASIC6.84□□□□□ -1.31
USP11P51784 AL139098.1-201ENST00000407291 389 ntBASIC6.84□□□□□ -1.31
USP11P51784 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.84□□□□□ -1.31
USP11P51784 Z97055.1-201ENST00000419730 712 ntBASIC6.84□□□□□ -1.31
USP11P51784 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.84□□□□□ -1.31
USP11P51784 AC008072.1-201ENST00000434254 824 ntBASIC6.84□□□□□ -1.31
USP11P51784 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.84□□□□□ -1.31
USP11P51784 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.84□□□□□ -1.31
USP11P51784 H3F3BP1-201ENST00000440551 403 ntBASIC6.84□□□□□ -1.31
USP11P51784 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 RPL5P13-201ENST00000462840 709 ntBASIC6.84□□□□□ -1.31
USP11P51784 RN7SL269P-201ENST00000467795 305 ntBASIC6.84□□□□□ -1.31
USP11P51784 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.84□□□□□ -1.31
USP11P51784 AC073358.1-201ENST00000505671 684 ntBASIC6.84□□□□□ -1.31
USP11P51784 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.84□□□□□ -1.31
USP11P51784 AC010587.2-201ENST00000511727 448 ntBASIC6.84□□□□□ -1.31
USP11P51784 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.84□□□□□ -1.31
USP11P51784 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.84□□□□□ -1.31
USP11P51784 SMARCE1P4-201ENST00000523647 241 ntBASIC6.84□□□□□ -1.31
USP11P51784 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.84□□□□□ -1.31
USP11P51784 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms