Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC095055.1-201ENST00000603472 1113 ntBASIC5.49□□□□□ -1.53
HOXD12P35452 RPP40P2-201ENST00000603596 712 ntBASIC5.49□□□□□ -1.53
HOXD12P35452 AC098935.2-201ENST00000604222 466 ntBASIC5.49□□□□□ -1.53
HOXD12P35452 CYCSP41-201ENST00000616920 296 ntBASIC5.49□□□□□ -1.53
HOXD12P35452 AC139769.3-201ENST00000618383 175 ntBASIC5.49□□□□□ -1.53
HOXD12P35452 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXD12P35452 AP002505.2-201ENST00000623585 696 ntBASIC5.49□□□□□ -1.53
HOXD12P35452 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.49□□□□□ -1.53
HOXD12P35452 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXD12P35452 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXD12P35452 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.49□□□□□ -1.53
HOXD12P35452 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.49□□□□□ -1.53
HOXD12P35452 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXD12P35452 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
HOXD12P35452 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXD12P35452 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXD12P35452 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HOXD12P35452 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HOXD12P35452 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXD12P35452 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXD12P35452 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXD12P35452 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HOXD12P35452 MTND5P11-201ENST00000511037 1812 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 CCT8P1-201ENST00000413611 1657 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXD12P35452 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 RNU4-44P-201ENST00000363050 141 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 RNU5B-4P-201ENST00000363508 111 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HOXD12P35452 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXD12P35452 RNU1-106P-201ENST00000384382 164 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 RNU6-452P-201ENST00000384406 107 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HOXD12P35452 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HOXD12P35452 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXD12P35452 RNU4-74P-201ENST00000411280 161 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AL158825.1-201ENST00000414735 521 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 RNF10P1-201ENST00000418589 369 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 FABP5P3-201ENST00000437960 408 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 AC073648.4-201ENST00000442655 781 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 RSU1P1-201ENST00000453416 441 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXD12P35452 TPT1P1-201ENST00000458495 518 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 TPT1P3-201ENST00000492841 512 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AC093720.1-201ENST00000505681 714 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXD12P35452 AC133963.2-201ENST00000513686 578 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXD12P35452 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXD12P35452 AC084824.2-201ENST00000548906 345 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 AC010735.1-201ENST00000567305 1026 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXD12P35452 MIR4472-2-201ENST00000582069 67 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 MIR3936-201ENST00000584304 110 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HOXD12P35452 AL022067.1-201ENST00000602426 454 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AC090525.3-201ENST00000605601 189 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXD12P35452 AP004607.9-201ENST00000618202 316 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 AC090527.3-201ENST00000619041 548 ntBASIC5.48□□□□□ -1.53
HOXD12P35452 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXD12P35452 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXD12P35452 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HOXD12P35452 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HOXD12P35452 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
HOXD12P35452 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD12P35452 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXD12P35452 AL451142.2-201ENST00000429076 2090 ntBASIC5.47□□□□□ -1.53
HOXD12P35452 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD12P35452 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HOXD12P35452 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD12P35452 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
HOXD12P35452 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXD12P35452 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD12P35452 AC093311.1-201ENST00000506586 2021 ntBASIC5.47□□□□□ -1.53
HOXD12P35452 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXD12P35452 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HOXD12P35452 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HOXD12P35452 MIR133B-201ENST00000362210 119 ntBASIC5.47□□□□□ -1.53
HOXD12P35452 RN7SKP103-201ENST00000363848 320 ntBASIC5.47□□□□□ -1.53
HOXD12P35452 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD12P35452 RNU6-207P-201ENST00000384137 107 ntBASIC5.47□□□□□ -1.53
HOXD12P35452 RNA5SP487-201ENST00000410186 122 ntBASIC5.47□□□□□ -1.53
HOXD12P35452 RNU6-603P-201ENST00000411403 107 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms